RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 DEKP35659 375 aaKnown RBP1.64□□□□□ -2.15
SMC4-205ENST00000465563 NUP62P37198 522 aaPredicted RBP1.64□□□□□ -2.15
SMC4-205ENST00000465563 ACOT2P49753 483 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 FMODQ06828 376 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 SLC9A3R2Q15599 337 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 HCP5Q6MZN7 132 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 Q6ZS52 159 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 Q6ZT83 130 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 LINC00596Q86U02 117 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 ST13P4Q8IZP2 240 aaPredicted RBP1.64□□□□□ -2.15
SMC4-205ENST00000465563 ZFP82Q8N141 532 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 PDCL2Q8N4E4 241 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 RPRMLQ8N4K4 120 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 OR2M3Q8NG83 312 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 OR2Y1Q8NGV0 311 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 OR8S1Q8NH09 359 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 FXYD5Q96DB9 178 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 MSANTD3Q96H12 275 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 FMC1Q96HJ9 113 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 ZNF396Q96N95 335 aaPredicted RBP1.64□□□□□ -2.15
SMC4-205ENST00000465563 VAT1Q99536 393 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 SRRQ9GZT4 340 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 POMKQ9H5K3 350 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 VCX3AQ9NNX9 186 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 ZNF706Q9Y5V0 76 aaPredicted RBP1.64□□□□□ -2.15
SMC4-205ENST00000465563 TRPM6Q9BX84 2022 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 NACADO15069 1562 aa1.64□□□□□ -2.15
SMC4-205ENST00000465563 RBFOX3A6NFN3 312 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 C15orf65H3BRN8 121 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 CDIPTO14735 213 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 COX7A2P2O60397 106 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 SHOX2O60902 331 aaPredicted RBP1.63□□□□□ -2.15
SMC4-205ENST00000465563 KLHL2O95198 593 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 S100A9P06702 114 aaKnown RBP1.63□□□□□ -2.15
SMC4-205ENST00000465563 PTHLHP12272 177 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 CCNOP22674 350 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 CNTFRP26992 372 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 LCN1P31025 176 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 GCLMP48507 274 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 FOXA1P55317 472 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 RAB38P57729 211 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 PSG3Q16557 428 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 KRTAP25-1Q3LHN0 102 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 PDZD11Q5EBL8 140 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 LIN9Q5TKA1 542 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 AADACL4Q5VUY2 407 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 AMMECR1LQ6DCA0 310 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 ZNF773Q6PK81 442 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 UGT2A3Q6UWM9 527 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 COMTD1Q86VU5 262 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 RBM45Q8IUH3 476 aaKnown RBP1.63□□□□□ -2.15
SMC4-205ENST00000465563 AMN1Q8IY45 258 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 CDRT4Q8N9R6 151 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 BLNKQ8WV28 456 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 PKMYT1Q99640 499 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 CIB1Q99828 191 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 BEX2Q9BXY8 128 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 PRRG3Q9BZD7 231 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 XKR8Q9H6D3 395 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 SDHAF3Q9NRP4 125 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 MAT2BQ9NZL9 334 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 NXT1Q9UKK6 140 aaKnown RBP1.63□□□□□ -2.15
SMC4-205ENST00000465563 LCTP09848 1927 aa1.63□□□□□ -2.15
SMC4-205ENST00000465563 IGHV3-21A0A0B4J1V1 117 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 CD300LBA8K4G0 201 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 A8MWP4 228 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 hCG_2039718K7EN88 272 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 MYO1DO94832 1006 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 CPSF4O95639 269 aaKnown RBP1.62□□□□□ -2.15
SMC4-205ENST00000465563 CST4P01036 141 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 IGLV6-57P01721 117 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 TRGV3P03979 118 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 GTF2H1P32780 548 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 TGFBR2P37173 567 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 LGALS7P47929 136 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 ETV1P50549 477 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 BAXQ07812 192 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 GPR176Q14439 515 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 TMEM241Q24JQ0 296 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 ZNF660Q6AZW8 331 aaPredicted RBP1.62□□□□□ -2.15
SMC4-205ENST00000465563 GALNT10Q86SR1 603 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 MARCH3Q86UD3 253 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 CYP4Z1Q86W10 505 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 TMEM25Q86YD3 366 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 C3orf22Q8N5N4 141 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 DRAXINQ8NBI3 349 aaPredicted RBP1.62□□□□□ -2.15
SMC4-205ENST00000465563 C22orf15Q8WYQ4 148 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 RBPMSQ93062 196 aaKnown RBP1.62□□□□□ -2.15
SMC4-205ENST00000465563 TMIGD2Q96BF3 282 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 C19orf60Q96EN9 201 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 ZNF75AQ96N20 296 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 YPEL4Q96NS1 127 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 HAUS4Q9H6D7 363 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 DNAJC27Q9NZQ0 273 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 NRCAMQ92823 1304 aa1.62□□□□□ -2.15
SMC4-205ENST00000465563 ATRNO75882 1429 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 PLPP3O14495 311 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 CA2P00918 260 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 IGKV5-2P06315 115 aa1.61□□□□□ -2.15
SMC4-205ENST00000465563 CCDC172P0C7W6 258 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms