RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FUT6P51993 359 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 ZNF91Q05481 1191 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 SPATS1Q496A3 300 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 LCNL1Q6ZST4 164 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 MEPCEQ7L2J0 689 aaKnown RBP11.4□□□□□ -0.58
SMC1A-204ENST00000463684 STPG2Q8N412 459 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 C5orf56Q8N8D9 126 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 CORO2AQ92828 525 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 RPEQ96AT9 228 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 HRASLS5Q96KN8 279 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 MAGIXQ9H6Y5 334 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 ARGLU1Q9NWB6 273 aaPredicted RBP11.4□□□□□ -0.58
SMC1A-204ENST00000463684 ACTR3BQ9P1U1 418 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 SCOCQ9UIL1 159 aa11.4□□□□□ -0.58
SMC1A-204ENST00000463684 A0A1B0GTI1 187 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 PRR32B1ATL7 298 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 SH2D1BO14796 132 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 FGF16O43320 207 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 CYB5AP00167 134 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 TMEM11P17152 192 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 OR3A1P47881 315 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 CDC42P60953 191 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 KIR2DS1Q14954 304 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 UBE2V2Q15819 145 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 PNLIPRP3Q17RR3 467 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 FAM98BQ52LJ0 330 aaKnown RBP11.39□□□□□ -0.59
SMC1A-204ENST00000463684 FAM58AQ8N1B3 248 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 TOMM40LQ969M1 308 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 BORCS8Q96FH0 119 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 APOL4Q9BPW4 351 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 GON7Q9BXV9 100 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 IL36RNQ9UBH0 155 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 COPS3Q9UNS2 423 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
SMC1A-204ENST00000463684 SNX5Q9Y5X3 404 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 SIRT4Q9Y6E7 314 aaPredicted RBP11.39□□□□□ -0.59
SMC1A-204ENST00000463684 R4GMQ9 66 aa11.39□□□□□ -0.59
SMC1A-204ENST00000463684 IGKV1-27A0A075B6S5 117 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 SIRPB1O00241 398 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 SRSF10O75494 262 aaKnown RBP11.38□□□□□ -0.59
SMC1A-204ENST00000463684 GATBO75879 557 aaKnown RBP11.38□□□□□ -0.59
SMC1A-204ENST00000463684 SERPINA3P01011 423 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 IGHG2P01859 326 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 PRKACAP17612 351 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 GDNFP39905 211 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 PTGFRP43088 359 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 SNU13P55769 128 aaKnown RBP11.38□□□□□ -0.59
SMC1A-204ENST00000463684 CDK5Q00535 292 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 GK3PQ14409 553 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 HNF4GQ14541 408 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 ZNF146Q15072 292 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 DEFB136Q30KP8 78 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 ZNF260Q3ZCT1 412 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 CXorf66Q5JRM2 361 aaPredicted RBP11.38□□□□□ -0.59
SMC1A-204ENST00000463684 SPIN3Q5JUX0 258 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 ZNF322Q6U7Q0 402 aaPredicted RBP11.38□□□□□ -0.59
SMC1A-204ENST00000463684 Q6ZSR3 168 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 SBSPONQ8IVN8 264 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 OR56B4Q8NH76 319 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 ZMAT4Q9H898 229 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 ZNF556Q9HAH1 456 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 RBFOX1Q9NWB1 397 aaKnown RBP11.38□□□□□ -0.59
SMC1A-204ENST00000463684 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
SMC1A-204ENST00000463684 A0A087X0M5 115 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 TRBV2A0A0J9YWF9 115 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 A0A1B0GX30 115 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 ENTPD6O75354 484 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 RPLP1P05386 114 aaKnown RBP11.37□□□□□ -0.59
SMC1A-204ENST00000463684 CALCBP10092 127 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 OSMP13725 252 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 ATP6V1B2P21281 511 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 NFYBP25208 207 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 CDX1P47902 265 aaPredicted RBP11.37□□□□□ -0.59
SMC1A-204ENST00000463684 GLIPR1P48060 266 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 NPBWR2P48146 333 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 CXCR4P61073 352 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 AESQ08117 197 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 C16orf89Q6UX73 402 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 DEFB107AQ8IZN7 70 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 DRAM1Q8N682 238 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 OR9G1Q8NH87 305 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 ADI1Q9BV57 179 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 EXOSC4Q9NPD3 245 aaKnown RBP11.37□□□□□ -0.59
SMC1A-204ENST00000463684 NDE1Q9NXR1 346 aa11.37□□□□□ -0.59
SMC1A-204ENST00000463684 TCRBV5S2A0A599 114 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 AP4M1O00189 453 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 MAGEB4O15481 346 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-204ENST00000463684 SYT7O43581 403 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 SASH3O75995 380 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 BCL3P20749 454 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 CCL1P22362 96 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 RBP2P50120 134 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 INSL3P51460 131 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 ATP1B3P54709 279 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 GPR50Q13585 617 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 ODF4Q2M2E3 257 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 ZFAND6Q6FIF0 208 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 PLEKHG7Q6ZR37 379 aa11.36□□□□□ -0.59
SMC1A-204ENST00000463684 CNN2Q99439 309 aaKnown RBP11.36□□□□□ -0.59
SMC1A-204ENST00000463684 ELAC2Q9BQ52 826 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms