RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 DUX4L9Q6RFH8 374 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-209ENST00000460573 BTNL3Q6UXE8 466 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 TPRA1Q86W33 373 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 CHST4Q8NCG5 386 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 OR5D13Q8NGL4 314 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 OR10K1Q8NGX5 313 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 PPP1R35Q8TAP8 253 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 TMEM158Q8WZ71 300 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 SNX22Q96L94 193 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 KCTD7Q96MP8 289 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 CHCHD6Q9BRQ6 235 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 DUX4Q9UBX2 424 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 MALRD1Q5VYJ5 2156 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 IGHV2-70DA0A0C4DH43 119 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 K7N7A8 449 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 SLC17A2O00624 439 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 SLC22A1O15245 554 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 FCN3O75636 299 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 CALCBP10092 127 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 NDUFB7P17568 137 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 RAB3BP20337 219 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 SERPINA2P20848 420 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 LMO1P25800 156 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 PAX2Q02962 417 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 SLC22A6Q4U2R8 563 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 BTN2A1Q7KYR7 527 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 LINC00596Q86U02 117 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 ASCC1Q8N9N2 400 aaKnown RBP18.61■□□□□ 0.57
C9orf3-209ENST00000460573 OR13F1Q8NGS4 319 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 DACT3Q96B18 629 aaPredicted RBP18.61■□□□□ 0.57
C9orf3-209ENST00000460573 GFI1Q99684 422 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 NUDT16L1Q9BRJ7 211 aaKnown RBP18.61■□□□□ 0.57
C9orf3-209ENST00000460573 PLGRKTQ9HBL7 147 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 METRNQ9UJH8 293 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 INSIG2Q9Y5U4 225 aa18.61■□□□□ 0.57
C9orf3-209ENST00000460573 KIR2DS1A0A191URI9 304 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 ZNF737O75373 536 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 TK1P04183 234 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 SELLP14151 372 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 DUSP1P28562 367 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 SNU13P55769 128 aaKnown RBP18.6■□□□□ 0.57
C9orf3-209ENST00000460573 FAHD2BQ6P2I3 314 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-209ENST00000460573 TEX29Q8N6K0 151 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 SPATA3Q8NHX4 192 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 FAHD2AQ96GK7 314 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 C1orf147Q96MC9 270 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-209ENST00000460573 DCTN5Q9BTE1 182 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 CST11Q9H112 138 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 MMP26Q9NRE1 261 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 NDUFA13Q9P0J0 144 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 ST3GAL6Q9Y274 331 aa18.6■□□□□ 0.57
C9orf3-209ENST00000460573 TRBV23-1A0A0A0MS06 115 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 LOC100506127A0A0U1RQW1 187 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 C22orf46C9J442 243 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 DEGS1O15121 323 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 OR2H2O95918 312 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 ZNF44P15621 663 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 RBM11P57052 281 aaKnown RBP18.59■□□□□ 0.57
C9orf3-209ENST00000460573 Q6P435 159 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 IL17RELQ6ZVW7 336 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 OR8H2Q8N162 312 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 C8orf46Q8TAG6 207 aa18.59■□□□□ 0.57
C9orf3-209ENST00000460573 RPUSD1Q9UJJ7 312 aaKnown RBP18.59■□□□□ 0.57
C9orf3-209ENST00000460573 DOCK11Q5JSL3 2073 aa18.58■□□□□ 0.57
C9orf3-209ENST00000460573 SHISA3A0PJX4 238 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 AIREO43918 545 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 BPNT1O95861 308 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 CFPP27918 469 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 RAB11BQ15907 218 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 MPV17LQ2QL34 196 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 CR1LQ2VPA4 569 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 FAM120AOSQ5T036 256 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 C17orf107Q6ZR85 190 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 LY6G5BQ8NDX9 201 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 KCNG3Q8TAE7 436 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 H1FXQ92522 213 aaKnown RBP18.58■□□□□ 0.56
C9orf3-209ENST00000460573 MRI1Q9BV20 369 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 IFT22Q9H7X7 185 aa18.58■□□□□ 0.56
C9orf3-209ENST00000460573 A0A0G2JK05 382 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 TMEM82A0PJX8 343 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 H3BUI4 141 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 SIRPB1O00241 398 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 CRTAPO75718 401 aaPredicted RBP18.57■□□□□ 0.56
C9orf3-209ENST00000460573 TFAP2AP05549 437 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 GABRR1P24046 479 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 PAX8Q06710 450 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 SCN1BQ07699 218 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 PIGYQ3MUY2 71 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 GDPD3Q7L5L3 318 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 FGFRL1Q8N441 504 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 SLC25A28Q96A46 364 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 CENPOQ9BU64 300 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 FUNDC2Q9BWH2 189 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 C7orf69Q9H7B7 122 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 STEAP1Q9UHE8 339 aa18.57■□□□□ 0.56
C9orf3-209ENST00000460573 FAM90A10PA6NDY2 464 aa18.56■□□□□ 0.56
C9orf3-209ENST00000460573 FAM90A18PA6NE21 464 aa18.56■□□□□ 0.56
C9orf3-209ENST00000460573 FAM90A16PA6NEW6 464 aa18.56■□□□□ 0.56
C9orf3-209ENST00000460573 A6NHS1 94 aa18.56■□□□□ 0.56
C9orf3-209ENST00000460573 FAM90A20PA6NIJ5 464 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms