RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 ATP6AP1LQ52LC2 224 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 UBE2NLQ5JXB2 153 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 CA13Q8N1Q1 262 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 OR8S1Q8NH09 359 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 C2orf15Q8WU43 125 aaKnown RBP2.2□□□□□ -2.06
VBP1-202ENST00000460509 PDCD6IPQ8WUM4 868 aaKnown RBP2.2□□□□□ -2.06
VBP1-202ENST00000460509 TNFRSF14Q92956 283 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 CPB2Q96IY4 423 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 GLT1D1Q96MS3 346 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 RILPQ96NA2 401 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 TRNT1Q96Q11 434 aaKnown RBP2.2□□□□□ -2.06
VBP1-202ENST00000460509 ASB7Q9H672 318 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 VCX3AQ9NNX9 186 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 C12orf4Q9NQ89 552 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 CHMP5Q9NZZ3 219 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 CD300AQ9UGN4 299 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 MCTS1Q9ULC4 181 aaKnown RBP2.2□□□□□ -2.06
VBP1-202ENST00000460509 TRAPPC1Q9Y5R8 145 aa2.2□□□□□ -2.06
VBP1-202ENST00000460509 COL5A1P20908 1838 aaPredicted RBP2.19□□□□□ -2.06
VBP1-202ENST00000460509 SSH2Q76I76 1423 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 GOLGA8QA0A0J9YX86 632 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 SLC5A10A0PJK1 596 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 RAB19A4D1S5 217 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 D6RAR5 112 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 H3BQ85 93 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 K7ERS5 55 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 UPK1AO00322 258 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 COX7A2P2O60397 106 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 SCN2BO60939 215 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 NDUFS6O75380 124 aaKnown RBP2.19□□□□□ -2.06
VBP1-202ENST00000460509 CST4P01036 141 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 TRGV3P03979 118 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 MLNP12872 115 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 IMPA1P29218 277 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 STX3Q13277 289 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 HCP5Q6MZN7 132 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 FAM9CQ8IZT9 166 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 SYS1Q8N2H4 156 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 ZNF555Q8NEP9 628 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 OR2K2Q8NGT1 345 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.19□□□□□ -2.06
VBP1-202ENST00000460509 PKMYT1Q99640 499 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 SYT4Q9H2B2 425 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 PARVGQ9HBI0 331 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 SDHAF2Q9NX18 166 aa2.19□□□□□ -2.06
VBP1-202ENST00000460509 LTBP4Q8N2S1 1624 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 IGKV1OR2-108A0A075B7D4 117 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 E7EWF7 191 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 ISLRO14498 428 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 PRMT5O14744 637 aaPredicted RBP2.18□□□□□ -2.06
VBP1-202ENST00000460509 AQP9O43315 295 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 CDK14O94921 469 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 NQO2P16083 231 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 LGALS3P17931 250 aaKnown RBP2.18□□□□□ -2.06
VBP1-202ENST00000460509 BGNP21810 368 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 IL12BP29460 328 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 P2RY2P41231 377 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 CCL23P55773 120 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 SLAMF1Q13291 335 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 COTL1Q14019 142 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 ENDOGQ14249 297 aaKnown RBP2.18□□□□□ -2.06
VBP1-202ENST00000460509 CCDC122Q5T0U0 273 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 ZNF470Q6ECI4 717 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 AMN1Q8IY45 258 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 C17orf78Q8N4C9 275 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 OR6N2Q8NGY6 317 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 UBA3Q8TBC4 463 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 CCDC12Q8WUD4 166 aaPredicted RBP2.18□□□□□ -2.06
VBP1-202ENST00000460509 ADTRPQ96IZ2 230 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 ARL5BQ96KC2 179 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 YPEL4Q96NS1 127 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 CYTH2Q99418 400 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 VAT1Q99536 393 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 SHCBP1LQ9BZQ2 653 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 WDR55Q9H6Y2 383 aaPredicted RBP2.18□□□□□ -2.06
VBP1-202ENST00000460509 CLEC2DQ9UHP7 191 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 ENPP5Q9UJA9 477 aa2.18□□□□□ -2.06
VBP1-202ENST00000460509 CACNA1DQ01668 2161 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 ZBED9Q6R2W3 1325 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 A0A0B4J2C4 111 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 GMNCA6NCL1 334 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 ZNF593O00488 134 aaPredicted RBP2.17□□□□□ -2.06
VBP1-202ENST00000460509 SYNGR2O43760 224 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 CRATP43155 626 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 XKP51811 444 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 OR2B6P58173 313 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 STX4Q12846 297 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 BNIP2Q12982 314 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 ANGPT1Q15389 498 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 TNXAQ16473 311 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 KRTAP25-1Q3LHN0 102 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 LINC00303Q3SY05 128 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 ZNF404Q494X3 552 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 ACTBL2Q562R1 376 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 CLLU1OSQ5K130 101 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 WDR59Q6PJI9 974 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 CYP4Z1Q86W10 505 aa2.17□□□□□ -2.06
VBP1-202ENST00000460509 SELENOHQ8IZQ5 122 aaKnown RBP2.17□□□□□ -2.06
VBP1-202ENST00000460509 EIF4E3Q8N5X7 224 aaKnown RBP2.17□□□□□ -2.06
VBP1-202ENST00000460509 OR6K3Q8NGY3 331 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms