RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TMEM106BQ9NUM4 274 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 FLRT3Q9NZU0 649 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 COMMD3Q9UBI1 195 aa4.87□□□□□ -1.63
CDC42BPA-209ENST00000448940 PINLYPA6NC86 204 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 K7EPK0 472 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CSN1S1P47710 185 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF136P52737 540 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 GABRA6Q16445 453 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM249Q2WGJ8 235 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 EBLN2Q6P2I7 272 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM71E2Q8N5Q1 922 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 LSMEM1Q8N8F7 131 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 FLVCR1-AS1Q8TAF5 88 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 KIRREL1Q96J84 757 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TEX37Q96LM6 180 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ACOT13Q9NPJ3 140 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TMEM210A6NLX4 147 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 RPA2P15927 270 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SPHARQ15513 63 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 MSMO1Q15800 293 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 IGSF11Q5DX21 431 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TNFAIP8L3Q5GJ75 292 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 HES5Q5TA89 166 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 LYSMD2Q8IV50 215 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 GALMQ96C23 342 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR2M2Q96R28 347 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SIGLEC11Q96RL6 698 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF281Q9Y2X9 895 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 MS4A18H0YCH9 400 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 MT-CO2P00403 227 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 RPS27P42677 84 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 PSMA6P60900 246 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 MS4A18Q3C1V0 323 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF672Q499Z4 452 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 KDM4DQ6B0I6 523 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 HIST2H3AQ71DI3 136 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SLC25A42Q86VD7 318 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF695Q8IW36 515 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM58AQ8N1B3 248 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR10J5Q8NHC4 309 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 RBPMSQ93062 196 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SPSB1Q96BD6 273 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CHST6Q9GZX3 395 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ACOXLQ9NUZ1 547 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ING1Q9UK53 422 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 C17orf100A8MU93 164 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 GASTP01350 101 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CAPNS1P04632 268 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CELA3BP08861 270 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SULT1A2P50226 295 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TGIF2LXQ8IUE1 241 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNF122Q9H9V4 155 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 LIN7BQ9HAP6 207 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 NUP210Q8TEM1 1887 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 AP4M1O00189 453 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SELENOFO60613 162 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TXNDC12O95881 172 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 PAX6P26367 422 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CALCRP30988 508 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 MAGEB1P43366 347 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 FXYD6P3P58550 94 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SNRPGP62308 76 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CDNFQ49AH0 187 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNASE10Q5GAN6 216 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 HACD4Q5VWC8 232 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TRAT1Q6PIZ9 186 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 BRD3OSQ6XYD6 125 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 B3GLCTQ6Y288 498 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 WDR88Q6ZMY6 472 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 RIMKLAQ8IXN7 391 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 NKAIN3Q8N8D7 197 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ASB10Q8WXI3 467 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 DOK1Q99704 481 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 MESP1Q9BRJ9 268 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 IL36GQ9NZH8 169 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CCL27Q9Y4X3 112 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 F8P00451 2351 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 SMIM17P0DL12 118 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 AKR1C1Q04828 323 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TNXAQ16473 311 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 CNPY1Q3B7I2 92 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 PRAMEF6Q5VXH4 476 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ACSM6Q6P461 480 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 UNQ5815/PRO19632Q6UWF5 114 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 RNF144BQ7Z419 303 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 TSPYL5Q86VY4 417 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 OR10S1Q8NGN2 331 aa4.86□□□□□ -1.63
CDC42BPA-209ENST00000448940 ZNF705EA8MWA4 302 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 IGKV1D-16P01601 117 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 APELAP0DMC3 54 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 IGHV1-2P23083 117 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 KIR2DL2P43627 348 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 LUMP51884 338 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 MADCAM1Q13477 382 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 H3F3CQ6NXT2 135 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 DEGS2Q6QHC5 323 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 PLET1Q6UQ28 207 aa4.85□□□□□ -1.63
CDC42BPA-209ENST00000448940 FAM131AQ6UXB0 335 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms