RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 ENSAO43768 121 aaKnown RBP15.25■□□□□ 0.03
RFTN1-202ENST00000431547 OR2H2O95918 312 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 TFAP2AP05549 437 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 RANBP1P43487 201 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 PAX8Q06710 450 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 CR1LQ2VPA4 569 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 BTNL3Q6UXE8 466 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 C17orf107Q6ZR85 190 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 TPRA1Q86W33 373 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 ASCC1Q8N9N2 400 aaKnown RBP15.25■□□□□ 0.03
RFTN1-202ENST00000431547 CHST4Q8NCG5 386 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 LY6G5BQ8NDX9 201 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 OR5D13Q8NGL4 314 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 C8orf46Q8TAG6 207 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 SHARPINQ9H0F6 387 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 PLGRKTQ9HBL7 147 aa15.25■□□□□ 0.03
RFTN1-202ENST00000431547 YLPM1P49750 1951 aaKnown RBP15.24■□□□□ 0.03
RFTN1-202ENST00000431547 A0A0G2JK05 382 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 LOC100506127A0A0U1RQW1 187 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 A0A1W2PP11 408 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 PSPNO60542 156 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 RAB3BP20337 219 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 ALDH3B2P48448 385 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 RBM11P57052 281 aaKnown RBP15.24■□□□□ 0.03
RFTN1-202ENST00000431547 PIGYQ3MUY2 71 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 LINC00596Q86U02 117 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 OR8H2Q8N162 312 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 PPP1R35Q8TAP8 253 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 H1FXQ92522 213 aaKnown RBP15.24■□□□□ 0.03
RFTN1-202ENST00000431547 CENPOQ9BU64 300 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 TMPRSS13Q9BYE2 586 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 CST11Q9H112 138 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 C7orf69Q9H7B7 122 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 IFT22Q9H7X7 185 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 CSPG4Q6UVK1 2322 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 MED13LQ71F56 2210 aa15.24■□□□□ 0.03
RFTN1-202ENST00000431547 TRBV23-1A0A0A0MS06 115 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 SIRPB1O00241 398 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 AIREO43918 545 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 BPNT1O95861 308 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 VSIG8P0DPA2 414 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 ZNF44P15621 663 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 GABRR1P24046 479 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 CFPP27918 469 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 SCN1BQ07699 218 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 RAB11BQ15907 218 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 FAM120AOSQ5T036 256 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 TMEM104Q8NE00 496 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 KCNG3Q8TAE7 436 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 POM121Q96HA1 1249 aa15.23■□□□□ 0.03
RFTN1-202ENST00000431547 ABCA1O95477 2261 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 ABCA2Q9BZC7 2435 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 IFITM5A6NNB3 132 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 INAFM1C9JVW0 142 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 SLC33A1O00400 549 aaPredicted RBP15.22■□□□□ 0.03
RFTN1-202ENST00000431547 GEMIN2O14893 280 aaKnown RBP15.22■□□□□ 0.03
RFTN1-202ENST00000431547 CRTAPO75718 401 aaPredicted RBP15.22■□□□□ 0.03
RFTN1-202ENST00000431547 PPIAL4GP0DN37 164 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 ARSBP15848 533 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 MGMTP16455 207 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 OR10A3P58181 314 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 QRFPP83859 136 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 PDCD1Q15116 288 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 GRK1Q15835 563 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 MPV17LQ2QL34 196 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 OR4S1Q8NGB4 309 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 FUNDC2Q9BWH2 189 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 BANF2Q9H503 90 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 RNF167Q9H6Y7 350 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 STEAP1Q9UHE8 339 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 OPN4Q9UHM6 478 aa15.22■□□□□ 0.03
RFTN1-202ENST00000431547 TRAV24A0A0B4J272 114 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A10PA6NDY2 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A18PA6NE21 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A16PA6NEW6 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A20PA6NIJ5 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A8PA6NJQ4 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A7PA6NKC0 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A22PA8MWA6 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 TMEM14DPA8MWL7 114 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A12PA8MX19 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A5PA8MXJ8 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A23PA8MXZ1 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 MGST3O14880 152 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 AVPP01185 164 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A15PP0C7V4 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A13PP0C7W8 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A14PP0C7W9 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM90A24PP0C7X0 464 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 SDC2P34741 201 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 OR3A1P47881 315 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 P2RY14Q15391 338 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 TAF9Q16594 264 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 C1orf229Q6ZS94 237 aaPredicted RBP15.21■□□□□ 0.03
RFTN1-202ENST00000431547 GDPD3Q7L5L3 318 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 NR2C2APQ86WQ0 139 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 TEX29Q8N6K0 151 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 FAM3DQ96BQ1 224 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 Q96M66 194 aa15.21■□□□□ 0.03
RFTN1-202ENST00000431547 MRI1Q9BV20 369 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms