RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 WNT2BQ93097 391 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 C2orf50Q96LR7 162 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 RCC2Q9P258 522 aaKnown RBP11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 KCNAB3O43448 404 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 NMBP08949 121 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 HOXC12P31275 282 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 LUMP51884 338 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 ERVS71-1P61550 626 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 RTP5Q14D33 572 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 IGFBP7Q16270 282 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 ACSF3Q4G176 576 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 TOR2AQ5JU69 321 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 INO80CQ6PI98 192 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 POC1AQ8NBT0 407 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 TAAR6Q96RI8 345 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 RNF126Q9BV68 326 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF471Q9BX82 626 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR2J1Q9GZK6 312 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
APOBEC3D-202ENST00000427494 H0YIZ8 118 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 TM4SF5O14894 197 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 TPD52L2O43399 206 aaKnown RBP11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 HERV-K104P61576 105 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 IL24Q13007 206 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 AANATQ16613 207 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 PHLDA2Q53GA4 152 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 THOC7Q6I9Y2 204 aaKnown RBP11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF585AQ6P3V2 769 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 LINC00596Q86U02 117 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 MOB3AQ96BX8 217 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 PIK3IP1Q96FE7 263 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 CXorf58Q96LI9 332 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 RTL8AQ9BWD3 113 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 PKIBQ9C010 78 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR51I2Q9H344 312 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 PLK3Q9H4B4 646 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 NAA60Q9H7X0 242 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM186AA6NE01 2351 aa11.96□□□□□ -0.49
APOBEC3D-202ENST00000427494 ESPL1Q14674 2120 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 TRBV6-7A0A0A0MS04 114 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 I3L521 148 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 AADACP22760 399 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 P2RX3P56373 397 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 RBM39Q14498 530 aaKnown RBP11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 IGSF11Q5DX21 431 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR2A2Q6IF42 318 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR5T2Q8NGG2 359 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 ARPC5LQ9BPX5 153 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 C1QTNF6Q9BXI9 259 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 Q9N2K0 584 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 KCNIP3Q9Y2W7 256 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 MEMO1Q9Y316 297 aa11.96□□□□□ -0.5
APOBEC3D-202ENST00000427494 URB1O60287 2271 aaKnown RBP11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 hCG_1807616A0A1W2PRN6 198 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 J3QT63 122 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 RHBDL1O75783 438 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 NAPSAO96009 420 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 COX5AP20674 150 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 FOXF2Q12947 444 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 RAB32Q13637 225 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 PRSS54Q6PEW0 395 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 Q6ZS49 121 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 SLC38A6Q8IZM9 456 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 FAM58AQ8N1B3 248 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 C17orf78Q8N4C9 275 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 SUMF2Q8NBJ7 301 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR1J1Q8NGS3 322 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 SLC25A40Q8TBP6 338 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 RTN4IP1Q8WWV3 396 aaPredicted RBP11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR5AC2Q9NZP5 309 aa11.95□□□□□ -0.5
APOBEC3D-202ENST00000427494 AHRRA9YTQ3 701 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 F5H0A9 414 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 AGFG2O95081 481 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 PET100P0DJ07 73 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 CBR1P16152 277 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 UCP2P55851 309 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 UCP3P55916 312 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 S100A10P60903 97 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 IL13RA2Q14627 380 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 SRSF7Q16629 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 IAH1Q2TAA2 248 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 SP6Q3SY56 376 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 RGS7BPQ6MZT1 257 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 RELL2Q8NC24 303 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 RRNAD1Q96FB5 475 aaKnown RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 ADAT1Q9BUB4 502 aaKnown RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 SPACA1Q9HBV2 294 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 DMXL1Q9Y485 3027 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 PPYP01298 95 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 IFNA21P01568 189 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 LYL1P12980 280 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 RAC2P15153 192 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms