RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CEACAM18A8MTB9 384 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 HEXAP06865 529 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 USF1P22415 310 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-204ENST00000427239 SNU13P55769 128 aaKnown RBP12.86□□□□□ -0.35
COL11A1-204ENST00000427239 IL13RA1P78552 427 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 TAF9Q16594 264 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 NLRC3Q7RTR2 1065 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 ZNF554Q86TJ5 538 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 LGALS14Q8TCE9 139 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 Q96MF0 132 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 CCL13Q99616 98 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 SLIRPQ9GZT3 109 aaKnown RBP12.86□□□□□ -0.35
COL11A1-204ENST00000427239 LPAR5Q9H1C0 372 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 KCNK15Q9H427 330 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 PATZ1Q9HBE1 687 aaKnown RBP12.86□□□□□ -0.35
COL11A1-204ENST00000427239 OTOGQ6ZRI0 2925 aa12.86□□□□□ -0.35
COL11A1-204ENST00000427239 A0A075B6Q4 140 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 SIGLEC5O15389 551 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 ADAM20O43506 726 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 OR7C1O76099 320 aaPredicted RBP12.85□□□□□ -0.35
COL11A1-204ENST00000427239 OR2H2O95918 312 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 WNT2P09544 360 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 ZNF44P15621 663 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 AMY2BP19961 511 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 SCN1BQ07699 218 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 IKZF1Q13422 519 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 Q6P435 159 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 OR56B1Q8NGI3 324 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 DCUN1D5Q9BTE7 237 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 COMMD3Q9UBI1 195 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 AKAP9Q99996 3911 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 SCGNO76038 276 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
COL11A1-204ENST00000427239 FUT3P21217 361 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 GABRR1P24046 479 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 PITPNBP48739 271 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 NPY4RP50391 375 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 LMO4P61968 165 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 COL10A1Q03692 680 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 OR5D13Q8NGL4 314 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 OR5H6Q8NGV6 325 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 CLDND2Q8NHS1 167 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 PPP1R35Q8TAP8 253 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 RAB40AQ8WXH6 277 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 RAB39BQ96DA2 213 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 NEIL1Q96FI4 390 aaPredicted RBP12.85□□□□□ -0.35
COL11A1-204ENST00000427239 GAFA1Q96PS6 74 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 NARFLQ9H6Q4 476 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 RHBDL2Q9NX52 303 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 ITGB1BP2Q9UKP3 347 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 MAB21L2Q9Y586 359 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 A3GALT2U3KPV4 340 aa12.85□□□□□ -0.35
COL11A1-204ENST00000427239 IGHV4-61A0A0C4DH41 118 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 GPR37O15354 613 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 NDUFB3O43676 98 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 GLAP06280 429 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 EFNB2P52799 333 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
COL11A1-204ENST00000427239 PDCD1Q15116 288 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 RAB12Q6IQ22 244 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 SAMD12Q8N8I0 201 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 ZNRF1Q8ND25 227 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 WFDC11Q8NEX6 87 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 PHF21AQ96BD5 680 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 S100A16Q96FQ6 103 aaKnown RBP12.84□□□□□ -0.35
COL11A1-204ENST00000427239 SNX22Q96L94 193 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 OR8B2Q96RD0 313 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 NXF2Q9GZY0 626 aaKnown RBP12.84□□□□□ -0.35
COL11A1-204ENST00000427239 ATG5Q9H1Y0 275 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 MMP27Q9H306 513 aa12.84□□□□□ -0.35
COL11A1-204ENST00000427239 PRRC2AP48634 2157 aaKnown RBP12.84□□□□□ -0.35
COL11A1-204ENST00000427239 F5H0A9 414 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-204ENST00000427239 K7N7A8 449 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 ZNF737O75373 536 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 IGHV2-5P01817 119 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 APOA1P02647 267 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 BLVRBP30043 206 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-204ENST00000427239 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-204ENST00000427239 VEGFCP49767 419 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 LRRC10Q5BKY1 277 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 UBE2NLQ5JXB2 153 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 ASCC1Q8N9N2 400 aaKnown RBP12.83□□□□□ -0.36
COL11A1-204ENST00000427239 MCFD2Q8NI22 146 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 NEDD4LQ96PU5 975 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 ITPR3Q14573 2671 aa12.83□□□□□ -0.36
COL11A1-204ENST00000427239 A0A0A6YYH2 397 aa12.82□□□□□ -0.36
COL11A1-204ENST00000427239 TRAV24A0A0B4J272 114 aa12.82□□□□□ -0.36
COL11A1-204ENST00000427239 A6NJ64 397 aa12.82□□□□□ -0.36
COL11A1-204ENST00000427239 SIRPB1O00241 398 aa12.82□□□□□ -0.36
COL11A1-204ENST00000427239 SLC33A1O00400 549 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-204ENST00000427239 DVL1O14640 695 aa12.82□□□□□ -0.36
COL11A1-204ENST00000427239 PDCD6O75340 191 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms