RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ENPP5Q9UJA9 477 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF391Q9UJN7 358 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 GNG8Q9UK08 70 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 OR52A1Q9UKL2 312 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 SLC22A13Q9Y226 551 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 RHBDD3Q9Y3P4 386 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 SNX5Q9Y5X3 404 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 V9GYS6 101 aa4.56□□□□□ -1.68
C9orf3-205ENST00000427193 hCG_38984A0A1B0GV85 526 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 SMIM31A0A1B0GVY4 71 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 A0A1W2PPR1 153 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 C5orf49A4QMS7 147 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 SHISA9B4DS77 424 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 LOC110117498-PIK3R3F6TDL0 507 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 H3BSA7 217 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 SPRY1O43609 319 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 GATBO75879 557 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 GOSR1O95249 250 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 UCHL1P09936 223 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 UBCP0CG48 685 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 CCL2P13500 99 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF250P15622 560 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 CD36P16671 472 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 IGFBP3P17936 291 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ACHEP22303 614 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 IL32P24001 234 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 PTAFRP25105 342 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ACKR3P25106 362 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 PSMA1P25786 263 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 CX3CR1P49238 355 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 GDI2P50395 445 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 IDH3GP51553 393 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 PRKXP51817 358 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 GBX2P52951 348 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 TMBIM6P55061 237 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 UCP2P55851 309 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 UBE2NP61088 152 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 RPS25P62851 125 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 FAM3AP98173 230 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 FABP5Q01469 135 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 GK2Q14410 553 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 INSL4Q14641 139 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 TSTQ16762 297 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF829Q3KNS6 432 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 YIF1BQ5BJH7 314 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 NCMAPQ5T1S8 102 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF704Q6ZNC4 412 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 MOGAT3Q86VF5 341 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 KRTAP7-1Q8IUC3 87 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 FOXRED2Q8IWF2 684 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 C1orf174Q8IYL3 243 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 RDH10Q8IZV5 341 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 LRRC75A-AS1Q8N1F1 130 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 YIPF7Q8N8F6 280 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ZFP41Q8N8Y5 198 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 CCDC54Q8NEL0 328 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 OR51A4Q8NGJ6 313 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF420Q8TAQ5 688 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 RPL3LQ92901 407 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 APOBEC3DQ96AK3 386 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 C10orf35Q96D05 121 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 DERL3Q96Q80 235 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 CENPOQ9BU64 300 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 FUNDC2Q9BWH2 189 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 KRTAP4-4Q9BYR3 166 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 TTTY10Q9BZA0 68 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 NAA50Q9GZZ1 169 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 KCNN2Q9H2S1 579 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF275Q9NSD4 429 aaPredicted RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 CENPMQ9NSP4 180 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 IKZF2Q9UKS7 526 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 POLR1DQ9Y2S0 133 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 STARD10Q9Y365 291 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 USF3Q68DE3 2245 aa4.55□□□□□ -1.68
C9orf3-205ENST00000427193 KMT2CQ8NEZ4 4911 aaKnown RBP4.55□□□□□ -1.68
C9orf3-205ENST00000427193 TRRAPQ9Y4A5 3859 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 PRKDCP78527 4128 aaKnown RBP4.54□□□□□ -1.68
C9orf3-205ENST00000427193 TRAV1-2A0A0B4J238 106 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 TRBV2A0A0J9YWF9 115 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 IQCMA0A1B0GVH7 501 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 LOC107986453A0A1B0GWG9 222 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 PMS2P5A8MQ11 134 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 ZNF879B4DU55 563 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 F5H5K5 113 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 H3BMQ9 156 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 GABRPO00591 440 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 PHF1O43189 567 aaPredicted RBP4.54□□□□□ -1.68
C9orf3-205ENST00000427193 XRCC2O43543 280 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 DHRS3O75911 302 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 RPP14O95059 124 aaKnown RBP4.54□□□□□ -1.68
C9orf3-205ENST00000427193 PTBP3O95758 552 aaKnown RBP4.54□□□□□ -1.68
C9orf3-205ENST00000427193 HLA-DPB1P04440 258 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 SLC2A1P11166 492 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 CD79AP11912 226 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 ADRA2CP18825 462 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 KITLGP21583 273 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 GADD45AP24522 165 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 PSMB9P28065 219 aa4.54□□□□□ -1.68
C9orf3-205ENST00000427193 GLRXP35754 106 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms