RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PLGRKTQ9HBL7 147 aa7.69□□□□□ -1.18
PDGFC-202ENST00000422544 PCDHB16Q9NRJ7 776 aa7.69□□□□□ -1.18
PDGFC-202ENST00000422544 IL36GQ9NZH8 169 aa7.69□□□□□ -1.18
PDGFC-202ENST00000422544 SLC25A10Q9UBX3 287 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-202ENST00000422544 OR5V1Q9UGF6 321 aa7.69□□□□□ -1.18
PDGFC-202ENST00000422544 GLS2Q9UI32 602 aa7.69□□□□□ -1.18
PDGFC-202ENST00000422544 POLR3KQ9Y2Y1 108 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-202ENST00000422544 V9GY05 133 aa7.69□□□□□ -1.18
PDGFC-202ENST00000422544 HIVEP2P31629 2446 aa7.69□□□□□ -1.18
PDGFC-202ENST00000422544 A0A0G2JK05 382 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 TMEM82A0PJX8 343 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 A8MV72 311 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-202ENST00000422544 C22orf46C9J442 243 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 K7N7A8 449 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 SIRPB1O00241 398 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 SLC22A1O15245 554 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 AIREO43918 545 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 ZNF780AO75290 641 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-202ENST00000422544 OR2H2O95918 312 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 TK1P04183 234 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 GTF2F2P13984 249 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 ZNF44P15621 663 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 RAB3BP20337 219 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 GABRR1P24046 479 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 SDC2P34741 201 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 ALDH3B2P48448 385 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 CAV3P56539 151 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 CLDN12P56749 244 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 LSM3P62310 102 aaKnown RBP7.68□□□□□ -1.18
PDGFC-202ENST00000422544 PAX2Q02962 417 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 GPR176Q14439 515 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 RAB11BQ15907 218 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 TIMM50Q3ZCQ8 353 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 SPIN3Q5JUX0 258 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 HES5Q5TA89 166 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 CD276Q5ZPR3 534 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 OR10K2Q6IF99 312 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 Q6P435 159 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 GDPGP1Q6ZNW5 385 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 NR2C2APQ86WQ0 139 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 OSR2Q8N2R0 312 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 ASCC1Q8N9N2 400 aaKnown RBP7.68□□□□□ -1.18
PDGFC-202ENST00000422544 TMEM104Q8NE00 496 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 OR51T1Q8NGJ9 327 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 OR6M1Q8NGM8 313 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 RAB40AQ8WXH6 277 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 H1FXQ92522 213 aaKnown RBP7.68□□□□□ -1.18
PDGFC-202ENST00000422544 FAM46BQ96A09 425 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 SNX22Q96L94 193 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 KCTD7Q96MP8 289 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 SEBOXQ9HB31 216 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-202ENST00000422544 ZNF581Q9P0T4 197 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 GHRLQ9UBU3 117 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 KCNS2Q9ULS6 477 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 ST3GAL6Q9Y274 331 aa7.68□□□□□ -1.18
PDGFC-202ENST00000422544 ARHGAP32A7KAX9 2087 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 PPIAL4CA0A0B4J2A2 164 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 IGHV2-70DA0A0C4DH43 119 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 A0A0G2JMP0 313 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 A0A0X1KG70 313 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 KIR2DS1A0A191URI9 304 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 SLC17A2O00624 439 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 PSPNO60542 156 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 ZNF737O75373 536 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 CRTAPO75718 401 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-202ENST00000422544 ECDO95905 644 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-202ENST00000422544 CLEC2LP0C7M8 214 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 UBBP0CG47 229 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 VSIG8P0DPA2 414 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 LMO1P25800 156 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 TGFBR1P36897 503 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 RBM11P57052 281 aaKnown RBP7.67□□□□□ -1.18
PDGFC-202ENST00000422544 MXD1Q05195 221 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 IL13RA2Q14627 380 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 TAF9Q16594 264 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 CR1LQ2VPA4 569 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 DCAF12L2Q5VW00 463 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 C17orf107Q6ZR85 190 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 GPR141Q7Z602 305 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 TPRA1Q86W33 373 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 OR4S1Q8NGB4 309 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 OR4M2Q8NGB6 313 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 OR4M1Q8NGD0 313 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 NUDT16L1Q9BRJ7 211 aaKnown RBP7.67□□□□□ -1.18
PDGFC-202ENST00000422544 SELENOIQ9C0D9 397 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 CHST6Q9GZX3 395 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 SHARPINQ9H0F6 387 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 FAM234AQ9H0X4 552 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 KCNK15Q9H427 330 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 C7orf69Q9H7B7 122 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 INSIG2Q9Y5U4 225 aa7.67□□□□□ -1.18
PDGFC-202ENST00000422544 YLPM1P49750 1951 aaKnown RBP7.67□□□□□ -1.18
PDGFC-202ENST00000422544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.66□□□□□ -1.18
PDGFC-202ENST00000422544 A0A0B4J203 849 aa7.66□□□□□ -1.18
PDGFC-202ENST00000422544 TRAV24A0A0B4J272 114 aa7.66□□□□□ -1.18
PDGFC-202ENST00000422544 IFITM5A6NNB3 132 aa7.66□□□□□ -1.18
PDGFC-202ENST00000422544 SLC33A1O00400 549 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-202ENST00000422544 HSPB6O14558 160 aa7.66□□□□□ -1.18
PDGFC-202ENST00000422544 GEMIN2O14893 280 aaKnown RBP7.66□□□□□ -1.18
PDGFC-202ENST00000422544 ENSAO43768 121 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms