RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TK1P04183 234 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ACAA1P09110 424 aaPredicted RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TPT1P13693 172 aaKnown RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 GLRA1P23415 457 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 WNT5AP41221 380 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FOXG1P55316 489 aaPredicted RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 BAMBIQ13145 260 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SMCO1Q147U7 214 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ANKRD55Q3KP44 614 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 LRRC37A5PQ49AS3 106 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 HIKESHIQ53FT3 197 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SHEQ5VZ18 495 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 EIF5AL1Q6IS14 154 aaKnown RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 HSD17B13Q7Z5P4 300 aaPredicted RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZADH2Q8N4Q0 377 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FAM169BQ8N8A8 192 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 EXTL1Q92935 676 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RDH8Q9NYR8 311 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TUBD1Q9UJT1 453 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FBXO9Q9UK97 447 aaPredicted RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 CSAG2Q9Y5P2 127 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 IGKV1D-8A0A087WSZ0 117 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 C13orf42A0A1B0GVH6 325 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 DUXBA0A1W2PPF3 345 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 F8VVB4 439 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 F8VWA3 439 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 KNG1P01042 644 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PDGFAP04085 211 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PTGER4P35408 488 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NBL1P41271 181 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PIGPP57054 158 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RND3P61587 244 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 IL15RAQ13261 267 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FAM76BQ5HYJ3 339 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ALKAL2Q6UX46 152 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 POC1AQ8NBT0 407 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RBPMSQ93062 196 aaKnown RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SLX1AQ9BQ83 275 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 HDHD3Q9BSH5 251 aaPredicted RBP12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SHARPINQ9H0F6 387 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RASL12Q9NYN1 266 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NUP50Q9UKX7 468 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SMPD2O60906 423 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SPDEFO95238 335 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RLN2P04090 185 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 BCL3P20749 454 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 S100GP29377 79 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 AANATQ16613 207 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RGS7BPQ6MZT1 257 aaPredicted RBP12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FIP1L1Q6UN15 594 aaKnown RBP12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RTN4IP1Q8WWV3 396 aaPredicted RBP12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MAFIPQ8WZ33 124 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RSRP1Q9BUV0 290 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF471Q9BX82 626 aaPredicted RBP12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SLC2A9Q9NRM0 540 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TMED3Q9Y3Q3 217 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
HLA-DPA1-242ENST00000419277 IQCF6A8MYZ5 107 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 I3L521 148 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NGFP01138 241 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 IGKV3-15P01624 115 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 CBR1P16152 277 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZP3P21754 424 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FCGR2CP31995 323 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 OPRM1P35372 400 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NPBWR2P48146 333 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SNTB1Q13884 538 aaKnown RBP12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 P2RY6Q15077 328 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RSPO4Q2I0M5 234 aaPredicted RBP12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 LGI3Q8N145 548 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SLAMF9Q96A28 289 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 Q9N2K0 584 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MTCH1Q9NZJ7 389 aa12.46□□□□□ -0.41
HLA-DPA1-242ENST00000419277 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MFSD2BA6NFX1 497 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 NPIPB11E5RHQ5 1161 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 F5H0A9 414 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MSTNO14793 375 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SLC34A2O95436 690 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PPYP01298 95 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CCL2P13500 99 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 M6PRP20645 277 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 IGHV1-2P23083 117 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PPP1CBP62140 327 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ZNF169Q14929 603 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 FAM58AQ8N1B3 248 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SPERTQ8NA61 448 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ABHD14BQ96IU4 210 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TRIB1Q96RU8 372 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 WDR13Q9H1Z4 485 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR51I2Q9H344 312 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PLEKHA2Q9HB19 425 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SDHAF2Q9NX18 166 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PCDHB10Q9UN67 800 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 KCNMB2Q9Y691 235 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms