RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MEX3AA1L020 520 aaKnown RBP13.38□□□□□ -0.27
LINC00404-201ENST00000418660 FAM90A8PA6NJQ4 464 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 H3BUX3 64 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 OR2H2O95918 312 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 IGHV1-8P0DP01 117 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 TMEM225BP0DP42 221 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 MYL12AP19105 171 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 LMO1P25800 156 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 ERP29P30040 261 aaKnown RBP13.38□□□□□ -0.27
LINC00404-201ENST00000418660 OR3A1P47881 315 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 ZP1P60852 638 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 CDK5R1Q15078 307 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 LRRC75BQ2VPJ9 315 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 OR2G6Q5TZ20 316 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 XAF1Q6GPH4 301 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 ZNF529Q6P280 563 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 Q6ZSV7 163 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 GPR148Q8TDV2 347 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 RGP1Q92546 391 aaPredicted RBP13.38□□□□□ -0.27
LINC00404-201ENST00000418660 C16orf95Q9H693 158 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 BABAM2Q9NXR7 383 aa13.38□□□□□ -0.27
LINC00404-201ENST00000418660 SIRPB1O00241 398 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 MAGEB3O15480 346 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 OGG1O15527 345 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 TSPAN9O75954 239 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 CD2P06729 351 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 RAB3AP20336 220 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 SOX2P48431 317 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 P2RX3P56373 397 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 MED21Q13503 144 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 OGFRL1Q5TC84 451 aaPredicted RBP13.37□□□□□ -0.27
LINC00404-201ENST00000418660 TPRX1Q8N7U7 411 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 OR11H6Q8NGC7 330 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 CPNE2Q96FN4 548 aaPredicted RBP13.37□□□□□ -0.27
LINC00404-201ENST00000418660 TMEM80Q96HE8 168 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 CHCHD3Q9NX63 227 aaKnown RBP13.37□□□□□ -0.27
LINC00404-201ENST00000418660 TBL2Q9Y4P3 447 aaKnown RBP13.37□□□□□ -0.27
LINC00404-201ENST00000418660 NBEAL1Q6ZS30 2694 aa13.37□□□□□ -0.27
LINC00404-201ENST00000418660 FUOMA2VDF0 154 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 ODF3BA8MYP8 253 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 CASQ2O14958 399 aaPredicted RBP13.36□□□□□ -0.27
LINC00404-201ENST00000418660 CLPXO76031 633 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 ARG1P05089 322 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 CAPGP40121 348 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 MTNR1BP49286 362 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 PROK1P58294 105 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 SRSF4Q08170 494 aaKnown RBP13.36□□□□□ -0.27
LINC00404-201ENST00000418660 ZNF626Q68DY1 528 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 LHFPL4Q7Z7J7 247 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 CHST4Q8NCG5 386 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 PXT1Q8NFP0 134 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 OR52N1Q8NH53 320 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 GGHQ92820 318 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 CITED1Q99966 193 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 PPA2Q9H2U2 334 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 CLEC2DQ9UHP7 191 aa13.36□□□□□ -0.27
LINC00404-201ENST00000418660 UBE2J1Q9Y385 318 aaPredicted RBP13.36□□□□□ -0.27
LINC00404-201ENST00000418660 SIRT4Q9Y6E7 314 aaPredicted RBP13.36□□□□□ -0.27
LINC00404-201ENST00000418660 A0A0G2JK05 382 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 ZNF44P15621 663 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 PAX6P26367 422 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 SCN1BQ07699 218 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 LY6EQ16553 131 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 ELP2Q6IA86 826 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 ASPHD2Q6ICH7 369 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 Q6P435 159 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 BRICD5Q6PL45 260 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 TRAPPC6BQ86SZ2 158 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 C8orf59Q8N0T1 100 aaPredicted RBP13.35□□□□□ -0.27
LINC00404-201ENST00000418660 OR51A2Q8NGJ7 313 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 TMEM106AQ96A25 262 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 FOXRED1Q96CU9 486 aaPredicted RBP13.35□□□□□ -0.27
LINC00404-201ENST00000418660 SMIM19Q96E16 107 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 MALSU1Q96EH3 234 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 GPER1Q99527 375 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 TAS2R4Q9NYW5 299 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 ZNF281Q9Y2X9 895 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 SESN1Q9Y6P5 492 aa13.35□□□□□ -0.27
LINC00404-201ENST00000418660 VGLL3A8MV65 326 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 ANKRD65E5RJM6 399 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 GABRPO00591 440 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 DEGS1O15121 323 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 LALBAP00709 142 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 ALDOBP05062 364 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 CSN2P05814 226 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 KRTAP10-3P60369 221 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 AESQ08117 197 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 ST3GAL4Q11206 333 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 DYNC1I2Q13409 638 aaKnown RBP13.34□□□□□ -0.27
LINC00404-201ENST00000418660 SLC35E4Q6ICL7 350 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 SATL1Q86VE3 508 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 PIFOQ8TCI5 191 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 TNFAIP8L1Q8WVP5 186 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 CORO2AQ92828 525 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 TMEM133Q9H2Q1 129 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 RAB18Q9NP72 206 aa13.34□□□□□ -0.27
LINC00404-201ENST00000418660 CNOT2Q9NZN8 540 aaKnown RBP13.34□□□□□ -0.27
LINC00404-201ENST00000418660 TRGV10A0A0A0MS01 117 aa13.33□□□□□ -0.28
LINC00404-201ENST00000418660 EFCAB10A6NFE3 127 aa13.33□□□□□ -0.28
LINC00404-201ENST00000418660 SLC33A1O00400 549 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms