RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 CCL2P13500 99 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 SRD5A2P31213 254 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 MALLQ13021 153 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 LGI3Q8N145 548 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 ZNF611Q8N823 705 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 CPEB3Q8NE35 698 aaKnown RBP12.71□□□□□ -0.37
LINC00475-202ENST00000416438 MOB3AQ96BX8 217 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 SUCNR1Q9BXA5 334 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 SMCO4Q9NRQ5 59 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 DEPPQ9NTK1 212 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 CRIM1Q9NZV1 1036 aa12.71□□□□□ -0.37
LINC00475-202ENST00000416438 COL6A3P12111 3177 aa12.71□□□□□ -0.38
LINC00475-202ENST00000416438 BORCS7-ASMTA0A0B4J1R7 106 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 FAM24AA6NFZ4 105 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 SLC33A1O00400 549 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-202ENST00000416438 CYC1P08574 325 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 DUSP1P28562 367 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 FOLR3P41439 243 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 P2RY1P47900 373 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 FUT6P51993 359 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 SNRPEP62304 92 aaKnown RBP12.7□□□□□ -0.38
LINC00475-202ENST00000416438 HABP2Q14520 560 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-202ENST00000416438 HPSE2Q8WWQ2 592 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 SPACA1Q9HBV2 294 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 GPR35Q9HC97 309 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 PINLYPA6NC86 204 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 NKX2-6A6NCS4 301 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 HSPB6O14558 160 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 ST8SIA3O43173 380 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 PPYP01298 95 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 SEC11BP0C7V7 166 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
LINC00475-202ENST00000416438 HERV-K104P61576 105 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 KRTAP27-1Q3LI81 207 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 AWAT1Q58HT5 328 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 TMEM182Q6ZP80 229 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-202ENST00000416438 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 SYT3Q9BQG1 590 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 C19orf12Q9NSK7 152 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 FBXO7Q9Y3I1 522 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 NCKAP5O14513 1909 aa12.7□□□□□ -0.38
LINC00475-202ENST00000416438 LRRC3CA6NJW4 275 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 M0R036 132 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 NXPH3O95157 252 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 CBR1P16152 277 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 OMGP23515 440 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 GLP1RP43220 463 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 CLINT1Q14677 625 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 SFT2D1Q8WV19 159 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 GINS3Q9BRX5 216 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 KPTNQ9Y664 436 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 A0A096LPE4 126 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 CCDC163A0A0D9SF12 145 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 A0A1W2PPZ6 126 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 C7orf77A4D0Y5 90 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 GLAP06280 429 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 PPP1CCP36873 323 aaKnown RBP12.69□□□□□ -0.38
LINC00475-202ENST00000416438 POLR2GP62487 172 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00475-202ENST00000416438 SPIN3Q5JUX0 258 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 OR2V1Q8NHB1 315 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 HIST1H2BAQ96A08 127 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
LINC00475-202ENST00000416438 ABHD14AQ9BUJ0 271 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 MAGT1Q9H0U3 335 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 RGCCQ9H4X1 137 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 SLC7A10Q9NS82 523 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 LUZP4Q9P127 313 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 IL36RNQ9UBH0 155 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 POMT1Q9Y6A1 747 aa12.69□□□□□ -0.38
LINC00475-202ENST00000416438 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 C3orf85A0A1B0GTC6 90 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 MPPED1O15442 326 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 FUT3P21217 361 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 GNRHRP30968 328 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 SRYQ05066 204 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 ZFP36L1Q07352 338 aaKnown RBP12.68□□□□□ -0.38
LINC00475-202ENST00000416438 OR4D5Q8NGN0 318 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 ADGRG7Q96K78 797 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 SGCZQ96LD1 299 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 RSRP1Q9BUV0 290 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 NTN3O00634 580 aaPredicted RBP12.68□□□□□ -0.38
LINC00475-202ENST00000416438 SCTP09683 121 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 OR13C7P0DN81 318 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 ZNF44P15621 663 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 BCL3P20749 454 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00475-202ENST00000416438 IL13RA2Q14627 380 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 OR8B8Q15620 311 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 GPR157Q5UAW9 335 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 FAM213BQ8TBF2 198 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 KCNE4Q8WWG9 221 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 SLAMF9Q96A28 289 aa12.68□□□□□ -0.38
LINC00475-202ENST00000416438 FGF23Q9GZV9 251 aaPredicted RBP12.68□□□□□ -0.38
LINC00475-202ENST00000416438 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
LINC00475-202ENST00000416438 EIF3GO75821 320 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00475-202ENST00000416438 MMP7P09237 267 aaPredicted RBP12.67□□□□□ -0.38
LINC00475-202ENST00000416438 GDF1P27539 372 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms