RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 HAND1O96004 215 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 IGKV1D-12P01611 117 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 ZNF44P15621 663 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 ARSBP15848 533 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 GABRR1P24046 479 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 SDC2P34741 201 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 RBMXP38159 391 aaKnown RBP8.77□□□□□ -1.01
RPAIN-204ENST00000405578 SNU13P55769 128 aaKnown RBP8.77□□□□□ -1.01
RPAIN-204ENST00000405578 LSM3P62310 102 aaKnown RBP8.77□□□□□ -1.01
RPAIN-204ENST00000405578 HOXA4Q00056 320 aaPredicted RBP8.77□□□□□ -1.01
RPAIN-204ENST00000405578 IKZF1Q13422 519 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 IL13RA2Q14627 380 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 GPR107Q5VW38 600 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 ZNF788Q6ZQV5 615 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 RNF144BQ7Z419 303 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 C1QL2Q7Z5L3 287 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 LINC00596Q86U02 117 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 GLCCI1Q86VQ1 547 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 ANKRD13BQ86YJ7 626 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 CROCCP3Q8IVE0 287 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 ASCC1Q8N9N2 400 aaKnown RBP8.77□□□□□ -1.01
RPAIN-204ENST00000405578 CHST4Q8NCG5 386 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 TMEM185AQ8NFB2 350 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 Q8NFD4 153 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 OR4D6Q8NGJ1 314 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 OR10K1Q8NGX5 313 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 NKX3-1Q99801 234 aaPredicted RBP8.77□□□□□ -1.01
RPAIN-204ENST00000405578 CENPOQ9BU64 300 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 FAM234AQ9H0X4 552 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 SPACA1Q9HBV2 294 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 SLC25A10Q9UBX3 287 aaPredicted RBP8.77□□□□□ -1.01
RPAIN-204ENST00000405578 STEAP1Q9UHE8 339 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 ST3GAL6Q9Y274 331 aa8.77□□□□□ -1.01
RPAIN-204ENST00000405578 TRAV20A0A0B4J274 112 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 FUOMA2VDF0 154 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 IFITM5A6NNB3 132 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 DVL1O14640 695 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 TNFRSF13BO14836 293 aaPredicted RBP8.76□□□□□ -1.01
RPAIN-204ENST00000405578 IL1AP01583 271 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 MSMBP08118 114 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 CD37P11049 281 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 NDUFB7P17568 137 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 GATA3P23771 443 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 IL2RGP31785 369 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 COMPP49747 757 aaPredicted RBP8.76□□□□□ -1.01
RPAIN-204ENST00000405578 COL10A1Q03692 680 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 MXD1Q05195 221 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 SCN1BQ07699 218 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 NHLRC3Q5JS37 347 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 WDR25Q64LD2 544 aaPredicted RBP8.76□□□□□ -1.01
RPAIN-204ENST00000405578 CRIP3Q6Q6R5 217 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 LYPD2Q6UXB3 125 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 BTNL3Q6UXE8 466 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 OR2W3Q7Z3T1 314 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 LYPD6Q86Y78 171 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 FAM216BQ8N7L0 139 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 OR51T1Q8NGJ9 327 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 OR5D13Q8NGL4 314 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 RAB2BQ8WUD1 216 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 ST8SIA4Q92187 359 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 URM1Q9BTM9 101 aaKnown RBP8.76□□□□□ -1.01
RPAIN-204ENST00000405578 MRI1Q9BV20 369 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 LPAR2Q9HBW0 351 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 ZNF222Q9UK12 451 aa8.76□□□□□ -1.01
RPAIN-204ENST00000405578 LOC105371242A0A075B767 164 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 PPIAL4CA0A0B4J2A2 164 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 A0A0G2JMP0 313 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 A0A0X1KG70 313 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 A0A1W2PPH5 198 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 A8MXK9 166 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 FAM157AC9JC47 383 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 OR7C1O76099 320 aaPredicted RBP8.75□□□□□ -1.01
RPAIN-204ENST00000405578 GABARAPO95166 117 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 MPIG6BO95866 241 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 LIPFP07098 398 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 CALCBP10092 127 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 MGMTP16455 207 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 DUSP1P28562 367 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 SERPINB10P48595 397 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 CAV3P56539 151 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 RBM11P57052 281 aaKnown RBP8.75□□□□□ -1.01
RPAIN-204ENST00000405578 OR10A3P58181 314 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 LCN2P80188 198 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 P2RY14Q15391 338 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 MPV17LQ2QL34 196 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 PRR31Q5SQ13 230 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 HES5Q5TA89 166 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 SFXN4Q6P4A7 337 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 USP43Q70EL4 1123 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 GDPD3Q7L5L3 318 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 CLVS1Q8IUQ0 354 aaPredicted RBP8.75□□□□□ -1.01
RPAIN-204ENST00000405578 TEX29Q8N6K0 151 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 CD177Q8N6Q3 437 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 ZNRF1Q8ND25 227 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 OR4M2Q8NGB6 313 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 ZFAND2BQ8WV99 257 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 H1FXQ92522 213 aaKnown RBP8.75□□□□□ -1.01
RPAIN-204ENST00000405578 GCDHQ92947 438 aaPredicted RBP8.75□□□□□ -1.01
RPAIN-204ENST00000405578 FAM46BQ96A09 425 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 TMEM186Q96B77 213 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms