RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ADAM20O43506 726 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 SCGNO76038 276 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 APOA1P02647 267 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 GLAP06280 429 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 WNT2P09544 360 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 ZNF44P15621 663 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 FUT3P21217 361 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 GABRR1P24046 479 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 VEGFCP49767 419 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 COL10A1Q03692 680 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 SCN1BQ07699 218 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 IKZF1Q13422 519 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 UBE2NLQ5JXB2 153 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 RAB12Q6IQ22 244 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 LYPD2Q6UXB3 125 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 CMTM4Q8IZR5 234 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 SAMD12Q8N8I0 201 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 OR56B1Q8NGI3 324 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 OR5D13Q8NGL4 314 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 PPP1R35Q8TAP8 253 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 S100A16Q96FQ6 103 aaKnown RBP10.27□□□□□ -0.77
LINC00339-201ENST00000404210 GAFA1Q96PS6 74 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 GAL3ST1Q99999 423 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 NUDT16L1Q9BRJ7 211 aaKnown RBP10.27□□□□□ -0.77
LINC00339-201ENST00000404210 NICN1Q9BSH3 213 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 FAM234AQ9H0X4 552 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 ATG5Q9H1Y0 275 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 SPACA1Q9HBV2 294 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 RHBDL2Q9NX52 303 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 APCP25054 2843 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 A0A0A6YYD4 124 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 FOXI3A8MTJ6 420 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 F5H0A9 414 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 K7N7A8 449 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 RAB27BO00194 218 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 SLC33A1O00400 549 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 CTDSP2O14595 271 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 TMPRSS2O15393 492 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 SOCS1O15524 211 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 ZNF737O75373 536 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 OR7C1O76099 320 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 BLVRBP30043 206 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 CEBPDP49716 269 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 NPY4RP50391 375 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 TMEM50BP56557 158 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 LMO4P61968 165 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 IL13RA1P78552 427 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 ATAD3CQ5T2N8 411 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 SIGIRRQ6IA17 410 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 ZNF841Q6ZN19 808 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 Q6ZTK2 550 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 BIVMQ86UB2 503 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 OR10R2Q8NGX6 335 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 PHF21AQ96BD5 680 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 SLC25A38Q96DW6 304 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 NEIL1Q96FI4 390 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 NEDD4LQ96PU5 975 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 DIABLOQ9NR28 239 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 RCC2Q9P258 522 aaKnown RBP10.26□□□□□ -0.77
LINC00339-201ENST00000404210 HSF4Q9ULV5 492 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 BAHCC1Q9P281 2608 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
LINC00339-201ENST00000404210 TRAV24A0A0B4J272 114 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 TMEM82A0PJX8 343 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 MCRIP1C9JLW8 97 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 SIRPB1O00241 398 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 RGS5O15539 181 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 NDUFB3O43676 98 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 PSPNO60542 156 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 HPGDSO60760 199 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 PDCD6O75340 191 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 IGHV2-5P01817 119 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 TFF1P04155 84 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 TK1P04183 234 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 RPS2P15880 293 aaKnown RBP10.25□□□□□ -0.77
LINC00339-201ENST00000404210 USF1P22415 310 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-201ENST00000404210 KCNJ3P48549 501 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 LOXL1Q08397 574 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-201ENST00000404210 RBM39Q14498 530 aaKnown RBP10.25□□□□□ -0.77
LINC00339-201ENST00000404210 ARL6IP1Q15041 203 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 C11orf91Q3C1V1 193 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 LRRC10Q5BKY1 277 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 METAP1DQ6UB28 335 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-201ENST00000404210 C17orf107Q6ZR85 190 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 NLRC3Q7RTR2 1065 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 SUMF2Q8NBJ7 301 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 ZNRF1Q8ND25 227 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 OR8B3Q8NGG8 313 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 RAB39BQ96DA2 213 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 Q96MF0 132 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 OR8B2Q96RD0 313 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 C6orf62Q9GZU0 229 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-201ENST00000404210 MIXL1Q9H2W2 232 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 PLEKHJ1Q9NW61 149 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 CTSZQ9UBR2 303 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 ADAM30Q9UKF2 790 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 PEX16Q9Y5Y5 336 aa10.25□□□□□ -0.77
LINC00339-201ENST00000404210 DOCK11Q5JSL3 2073 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms