RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 MPIG6BO95866 241 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 OR2H2O95918 312 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SCN1BQ07699 218 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 IKZF1Q13422 519 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 IDNKQ5T6J7 187 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 C17orf107Q6ZR85 190 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 USP43Q70EL4 1123 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 BIVMQ86UB2 503 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 KCNG3Q8TAE7 436 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 MRPS24Q96EL2 167 aaKnown RBP13.25□□□□□ -0.29
HMGA1-204ENST00000401473 NEIL1Q96FI4 390 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SMR3AQ99954 134 aa13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SEBOXQ9HB31 216 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-204ENST00000401473 SH2D1BO14796 132 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 ZNF737O75373 536 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 CD99P14209 185 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 SNRPBP14678 240 aaKnown RBP13.24□□□□□ -0.29
HMGA1-204ENST00000401473 LMO1P25800 156 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 BMXP51813 675 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 EFNB2P52799 333 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 TMEM249Q2WGJ8 235 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 SLC36A1Q7Z2H8 476 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 C18orf12Q96KH6 178 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 Q96M66 194 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 BCL7BQ9BQE9 202 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 NICN1Q9BSH3 213 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 CST11Q9H112 138 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 PCDHB16Q9NRJ7 776 aa13.24□□□□□ -0.29
HMGA1-204ENST00000401473 NIPBLQ6KC79 2804 aaeCLIP13.24□□□□□ -0.296e-7■■□□□ 12.3
HMGA1-204ENST00000401473 TMEM82A0PJX8 343 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 CCDC160A6NGH7 325 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 CHRM2P08172 466 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 CAPZA1P52907 286 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 IL13RA1P78552 427 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 FOXB2Q5VYV0 432 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 WDR25Q64LD2 544 aaPredicted RBP13.23□□□□□ -0.29
HMGA1-204ENST00000401473 SIGIRRQ6IA17 410 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 BRICD5Q6PL45 260 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 ZNF561Q8N587 486 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 MED30Q96HR3 178 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 LPAR5Q9H1C0 372 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 FBLN5Q9UBX5 448 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 A0A0A6YYD4 124 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 K7N7A8 449 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 SIRPB1O00241 398 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 DEGS1O15121 323 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 OR7C1O76099 320 aaPredicted RBP13.23□□□□□ -0.29
HMGA1-204ENST00000401473 ZNF44P15621 663 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 PITPNBP48739 271 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 RPS27AP62979 156 aaKnown RBP13.23□□□□□ -0.29
HMGA1-204ENST00000401473 IL13RA2Q14627 380 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 FIP1L1Q6UN15 594 aaKnown RBP13.23□□□□□ -0.29
HMGA1-204ENST00000401473 OR8B3Q8NGG8 313 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 OR5H6Q8NGV6 325 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 MSI2Q96DH6 328 aaKnown RBP13.23□□□□□ -0.29
HMGA1-204ENST00000401473 OR8B2Q96RD0 313 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 TMEM59Q9BXS4 323 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 CHST6Q9GZX3 395 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 LPAR2Q9HBW0 351 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 CLN8Q9UBY8 286 aa13.23□□□□□ -0.29
HMGA1-204ENST00000401473 KIAA1324LA8MWY0 1029 aaPredicted RBP13.22□□□□□ -0.29
HMGA1-204ENST00000401473 SLC33A1O00400 549 aaPredicted RBP13.22□□□□□ -0.29
HMGA1-204ENST00000401473 TK1P04183 234 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 INHBBP09529 407 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 IGHV4-31P0DP07 118 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 GABRR1P24046 479 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 RORCP51449 518 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 LCN2P80188 198 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 KRTAP1-1Q07627 177 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 NLRC3Q7RTR2 1065 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 OR2W3Q7Z3T1 314 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 BPIFB2Q8N4F0 458 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 ASCC1Q8N9N2 400 aaKnown RBP13.22□□□□□ -0.29
HMGA1-204ENST00000401473 DYNC2LI1Q8TCX1 351 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 C1orf159Q96HA4 380 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 SSBP3Q9BWW4 388 aaPredicted RBP13.22□□□□□ -0.29
HMGA1-204ENST00000401473 TM2D1Q9BX74 207 aa13.22□□□□□ -0.29
HMGA1-204ENST00000401473 SLC25A10Q9UBX3 287 aaPredicted RBP13.22□□□□□ -0.29
HMGA1-204ENST00000401473 NSD1Q96L73 2696 aaPredicted RBP13.21□□□□□ -0.29
HMGA1-204ENST00000401473 GNB2P62879 340 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 ESCO2Q56NI9 601 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 RTN4RL2Q86UN3 420 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 CROCCP3Q8IVE0 287 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 FAM89BQ8N5H3 189 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 OR4S1Q8NGB4 309 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 LGALS14Q8TCE9 139 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 IFT22Q9H7X7 185 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 MMP26Q9NRE1 261 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.29
HMGA1-204ENST00000401473 GLS2Q9UI32 602 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 RAB22AQ9UL26 194 aa13.21□□□□□ -0.29
HMGA1-204ENST00000401473 SMIM31A0A1B0GVY4 71 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 NKX6-3A6NJ46 265 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 HSPB6O14558 160 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 SOCS1O15524 211 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 NDUFB3O43676 98 aa13.21□□□□□ -0.3
HMGA1-204ENST00000401473 OR3A1P47881 315 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms