RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 WBP4O75554 376 aaKnown RBP9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 LIMS3P0CW19 117 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 LIMS4P0CW20 117 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 BCL3P20749 454 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 MDKP21741 143 aaPredicted RBP9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 DCKP27707 260 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 NPBWR2P48146 333 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 POU3F4P49335 361 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 SMN1Q16637 294 aaKnown RBP9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 MIDNQ504T8 468 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 ZNF691Q5VV52 312 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 PNKDQ8N490 385 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 C11orf42Q8N5U0 333 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 PACRGLQ8N7B6 248 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 ZSCAN4Q8NAM6 433 aaPredicted RBP9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 OR13C9Q8NGT0 318 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 CYGBQ8WWM9 190 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 SNX22Q96L94 193 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 KRTAP4-11Q9BYQ6 195 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 ZCCHC4Q9H5U6 513 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 RBFOX1Q9NWB1 397 aaKnown RBP9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 ZNRD1Q9P1U0 126 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 MMP24Q9Y5R2 645 aa9.6□□□□□ -0.87
SMIM11A-201ENST00000399292 IRGMA1A4Y4 181 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 SPRY1O43609 319 aaPredicted RBP9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 GPR137BO60478 399 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 NDUFA7O95182 113 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 CLIC3O95833 236 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 HAND1O96004 215 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 PF4P02776 101 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 CALCBP10092 127 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 PIPP12273 146 aaPredicted RBP9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 CCL3L1P16619 93 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 PRKACAP17612 351 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 GABRR1P24046 479 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 PEX2P28328 305 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 DUSP1P28562 367 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 RAG2P55895 527 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 LGALS4P56470 323 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 EDDM3BP56851 147 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 ERVFRD-1P60508 538 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 ZNF273Q14593 569 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 ZNF146Q15072 292 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 RCN1Q15293 331 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 TAF9Q16594 264 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 HCP5Q6MZN7 132 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 RPL22L1Q6P5R6 122 aaKnown RBP9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 TMPRSS11AQ6ZMR5 421 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 GDPGP1Q6ZNW5 385 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 OR8H2Q8N162 312 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 DHRSXQ8N5I4 330 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 PARP16Q8N5Y8 322 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 SETD9Q8NE22 299 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 RFT1Q96AA3 541 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 SPACA5Q96QH8 159 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 PDCD1LG2Q9BQ51 273 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 JAM3Q9BX67 310 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 SLITRK2Q9H156 845 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 DHDHQ9UQ10 334 aa9.59□□□□□ -0.87
SMIM11A-201ENST00000399292 hADV38S2A0JD32 116 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 TMEM82A0PJX8 343 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 C17orf98A8MV24 154 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 SH2D1BO14796 132 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 HCKP08631 526 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 ZNF728P0DKX0 622 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 ETV1P50549 477 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 GTF2A1P52655 376 aaPredicted RBP9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 SNU13P55769 128 aaKnown RBP9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 ADARB1P78563 741 aaKnown RBP9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 MEF2CQ06413 473 aaPredicted RBP9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 EDDM3AQ14507 147 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 GRK1Q15835 563 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 CCDC58Q4VC31 144 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 SPIN3Q5JUX0 258 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 C17orf107Q6ZR85 190 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 SAXO1Q8IYX7 474 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 BEND2Q8NDZ0 799 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 OR5R1Q8NH85 324 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 PPP1R35Q8TAP8 253 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 CNIH3Q8TBE1 160 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 TSEN15Q8WW01 171 aaKnown RBP9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 RHOFQ9HBH0 211 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 HMG20AQ9NP66 347 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 CHCHD3Q9NX63 227 aaKnown RBP9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 BABAM2Q9NXR7 383 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 IL36RNQ9UBH0 155 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 VPREB3Q9UKI3 123 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 GSTK1Q9Y2Q3 226 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 PCDHGB5Q9Y5G0 923 aa9.58□□□□□ -0.88
SMIM11A-201ENST00000399292 IGKV1-12A0A0C4DH73 117 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 CLPSL1A2RUU4 121 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 MAGEB3O15480 346 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 SULT1B1O43704 296 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 PSPNO60542 156 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 KDM4BO94953 1096 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 IGKV1D-12P01611 117 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 TMEM225BP0DP42 221 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 MYL12AP19105 171 aa9.57□□□□□ -0.88
SMIM11A-201ENST00000399292 RAB3AP20336 220 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms