RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MAGEA13PA6NCF6 341 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 A6NDX4 124 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 ZNF850A8MQ14 1090 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 OGG1O15527 345 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 RHBDL1O75783 438 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 TTRP02766 147 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 UBCP0CG48 685 aaKnown RBP12.98□□□□□ -0.33
CUX2-202ENST00000397643 PSG2P11465 335 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 KIR3DL2P43630 455 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 GABRA2P47869 451 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 GTF2A1P52655 376 aaPredicted RBP12.98□□□□□ -0.33
CUX2-202ENST00000397643 NANOS3P60323 173 aaKnown RBP12.98□□□□□ -0.33
CUX2-202ENST00000397643 KRTAP10-11P60412 298 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 CDK5R1Q15078 307 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 TMEM244Q5VVB8 128 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 LHFPL4Q7Z7J7 247 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 ZNF676Q8N7Q3 588 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 CCDC54Q8NEL0 328 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 TMEM185AQ8NFB2 350 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 OR51E1Q8TCB6 317 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 ITFG2Q969R8 447 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 SDSLQ96GA7 329 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 COMMD4Q9H0A8 199 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 ISYNA1Q9NPH2 558 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 MPC1Q9Y5U8 109 aa12.98□□□□□ -0.33
CUX2-202ENST00000397643 TMEM212A6NML5 194 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 OR4C45A6NMZ5 311 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 MTRF1O75570 445 aaKnown RBP12.97□□□□□ -0.33
CUX2-202ENST00000397643 LALBAP00709 142 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 CST4P01036 141 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 HSMCR30P0CW71 290 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 ATP6V1B1P15313 513 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 CD33P20138 364 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 GLRA1P23415 457 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 RAB13P51153 203 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 CNN3Q15417 329 aaKnown RBP12.97□□□□□ -0.33
CUX2-202ENST00000397643 ODF4Q2M2E3 257 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 LDLRAD2Q5SZI1 272 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 TMEM219Q86XT9 240 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 OR5AK2Q8NH90 309 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 GPR84Q9NQS5 396 aa12.97□□□□□ -0.33
CUX2-202ENST00000397643 SYT7O43581 403 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 ISG15P05161 165 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 CELP19835 753 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 COX7A1P24310 79 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 CD83Q01151 205 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 MLLT11Q13015 90 aaPredicted RBP12.96□□□□□ -0.33
CUX2-202ENST00000397643 PLA1AQ53H76 456 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 UBE2UQ5VVX9 321 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 TMEM200BQ69YZ2 307 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 DMKNQ6E0U4 476 aaPredicted RBP12.96□□□□□ -0.33
CUX2-202ENST00000397643 XAF1Q6GPH4 301 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 KCTD8Q6ZWB6 473 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 FTMTQ8N4E7 242 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 ZFP41Q8N8Y5 198 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 RPS4Y2Q8TD47 263 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 UFD1Q92890 307 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 SMIM19Q96E16 107 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 RNF170Q96K19 258 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 LYZL4Q96KX0 146 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 WWC2-AS2Q96NR7 200 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 MGLLQ99685 303 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 HEXA-AS1Q9H8Q6 139 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 ABCB9Q9NP78 766 aa12.96□□□□□ -0.33
CUX2-202ENST00000397643 SIRT4Q9Y6E7 314 aaPredicted RBP12.96□□□□□ -0.33
CUX2-202ENST00000397643 DYNC2H1Q8NCM8 4307 aaKnown RBP12.95□□□□□ -0.34
CUX2-202ENST00000397643 A0A1B0GTI1 187 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 LOC107986453A0A1B0GWG9 222 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 ZFPL1O95159 310 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 IGLV3-1P01715 115 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 CD1AP06126 327 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 CCL3L1P16619 93 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 FAHP16930 419 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 PSMB9P28065 219 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 MAP2K3P46734 347 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 GPR50Q13585 617 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 RDH10Q8IZV5 341 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 GHSRQ92847 366 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 PDCD1LG2Q9BQ51 273 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 PRSS22Q9GZN4 317 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 OR51I2Q9H344 312 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 HHLA2Q9UM44 414 aa12.95□□□□□ -0.34
CUX2-202ENST00000397643 PNMA8CA0A1B0GUJ8 204 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 TRIM64CA6NLI5 447 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 ODF3BA8MYP8 253 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 DHRS3O75911 302 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 CCL1P22362 96 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 GPM6AP51674 278 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 RPL31P62899 125 aaKnown RBP12.94□□□□□ -0.34
CUX2-202ENST00000397643 BLCAPP62952 87 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 RIPPLY1Q0D2K3 151 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 TPBGQ13641 420 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 DOC2BQ14184 412 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 ZNF273Q14593 569 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 NEDD8Q15843 81 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 TCTEX1D4Q5JR98 221 aa12.94□□□□□ -0.34
CUX2-202ENST00000397643 ZNF782Q6ZMW2 699 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms