RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 DTYMKP23919 212 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 LMO1P25800 156 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 BTN2A1Q7KYR7 527 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 ITLN1Q8WWA0 313 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 WDR13Q9H1Z4 485 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 ZNF230Q9UIE0 474 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-204ENST00000396548 RAI1Q7Z5J4 1906 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-204ENST00000396548 SLC33A1O00400 549 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-204ENST00000396548 OR7C1O76099 320 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-204ENST00000396548 FCER2P06734 321 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 FCGR3AP08637 254 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 EGR1P18146 543 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 TBPP20226 339 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 HLA-DMAP28067 261 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 DUSP1P28562 367 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 APOBEC3AP31941 199 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-204ENST00000396548 SRSF7Q16629 238 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRIM39-204ENST00000396548 MICBQ29980 383 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 GAPTQ8N292 157 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 SUMF2Q8NBJ7 301 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 OR56B4Q8NH76 319 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 RASL12Q9NYN1 266 aa10.71□□□□□ -0.69
TRIM39-204ENST00000396548 LRBAP50851 2863 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 C17orf100A8MU93 164 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 SRRM5B3KS81 715 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 M0QYG6 137 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 NDUFB6O95139 128 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 SNU13P55769 128 aaKnown RBP10.71□□□□□ -0.7
TRIM39-204ENST00000396548 BTG1P62324 171 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 VAX1Q5SQQ9 334 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 Q6ZS49 121 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 GCSAMQ8N6F7 178 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 DIRC2Q96SL1 478 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 SLC6A7Q99884 636 aa10.71□□□□□ -0.7
TRIM39-204ENST00000396548 DCHS2Q6V1P9 2916 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 RAG2P55895 527 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 ARFRP1Q13795 201 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 NKPD1Q17RQ9 610 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 PLET1Q6UQ28 207 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 IFT46Q9NQC8 304 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 UFSP2Q9NUQ7 469 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 TRBV6-6A0A0A6YYG2 114 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 UBE2QL1A1L167 161 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 RAB3DO95716 219 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 OR2H2O95918 312 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 HRH1P35367 487 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 IKZF1Q13422 519 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 SHEQ5VZ18 495 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 ZNF880Q6PDB4 577 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 OR51S1Q8NGJ8 323 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 FAM222BQ8WU58 562 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 DHRS9Q9BPW9 319 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 CHST6Q9GZX3 395 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 PLCE1Q9P212 2302 aa10.7□□□□□ -0.7
TRIM39-204ENST00000396548 NXPH2O95156 264 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 KNG1P01042 644 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 FAUP35544 74 aaKnown RBP10.69□□□□□ -0.7
TRIM39-204ENST00000396548 TNFAIP6P98066 277 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-204ENST00000396548 FAM90A1Q86YD7 464 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 ERGIC1Q969X5 290 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 DPCDQ9BVM2 203 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-204ENST00000396548 C20orf85Q9H1P6 137 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 FN3KRPQ9HA64 309 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 SPACA1Q9HBV2 294 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 EDARQ9UNE0 448 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 MEF2DQ14814 521 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 ATAD3CQ5T2N8 411 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 MOGAT3Q86VF5 341 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 BEST4Q8NFU0 473 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 OR13C8Q8NGS7 320 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 OR4K15Q8NH41 348 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 LRRC29Q8WV35 223 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 PIK3IP1Q96FE7 263 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 CMSS1Q9BQ75 279 aaKnown RBP10.69□□□□□ -0.7
TRIM39-204ENST00000396548 NUDT15Q9NV35 164 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 TREM2Q9NZC2 230 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 H3BUI4 141 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 RNF224P0DH78 156 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 BPIFB2Q8N4F0 458 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 MAFIPQ8WZ33 124 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 ST6GALNAC5Q9BVH7 336 aa10.69□□□□□ -0.7
TRIM39-204ENST00000396548 CISD1Q9NZ45 108 aaKnown RBP10.69□□□□□ -0.7
TRIM39-204ENST00000396548 CACNA1BQ00975 2339 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 B9A039 149 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 DEGS1O15121 323 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 HAND1O96004 215 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 PMP2P02689 132 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 ACTBL2Q562R1 376 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 C20orf204Q6ZNR8 217 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 OVCH2Q7RTZ1 564 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 TGIF2LYQ8IUE0 185 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 OR5AP2Q8NGF4 316 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 MRPL30Q8TCC3 161 aaKnown RBP10.68□□□□□ -0.7
TRIM39-204ENST00000396548 C12orf4Q9NQ89 552 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 MCUBQ9NWR8 336 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 FLVCR2Q9UPI3 526 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 A6NLC8 198 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 INMT-MINDY4F8WBC2 141 aa10.68□□□□□ -0.7
TRIM39-204ENST00000396548 GLRA1P23415 457 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms