RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ZNF665Q9H7R5 613 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 KAAG1Q9UBP8 84 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 FBLN5Q9UBX5 448 aa12.38□□□□□ -0.43
CCNE1-202ENST00000357943 F5H0A9 414 aaPredicted RBP12.37□□□□□ -0.43
CCNE1-202ENST00000357943 SH2D1BO14796 132 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 SIGLEC5O15389 551 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
CCNE1-202ENST00000357943 OR2H2O95918 312 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 ZNF44P15621 663 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 GABRR1P24046 479 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 RPS27AP62979 156 aaKnown RBP12.37□□□□□ -0.43
CCNE1-202ENST00000357943 IKZF1Q13422 519 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 IL13RA2Q14627 380 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 ZNF841Q6ZN19 808 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 SLC36A1Q7Z2H8 476 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 FGFRL1Q8N441 504 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 NICN1Q9BSH3 213 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 NXF2Q9GZY0 626 aaKnown RBP12.37□□□□□ -0.43
CCNE1-202ENST00000357943 LPAR5Q9H1C0 372 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 MIOXQ9UGB7 285 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 GLS2Q9UI32 602 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 NKX6-3A6NJ46 265 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 SIRPB1O00241 398 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 PSPNO60542 156 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 CHRM2P08172 466 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 RANBP1P43487 201 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 IL13RA1P78552 427 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 LOXL1Q08397 574 aaPredicted RBP12.37□□□□□ -0.43
CCNE1-202ENST00000357943 C17orf107Q6ZR85 190 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 BIVMQ86UB2 503 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 OR8B3Q8NGG8 313 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 NEIL1Q96FI4 390 aaPredicted RBP12.37□□□□□ -0.43
CCNE1-202ENST00000357943 CYYR1Q96J86 154 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 OR8B2Q96RD0 313 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 TM2D1Q9BX74 207 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 RAB22AQ9UL26 194 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 A3GALT2U3KPV4 340 aa12.37□□□□□ -0.43
CCNE1-202ENST00000357943 ZANQ9Y493 2812 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 TRAV24A0A0B4J272 114 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 TMEM82A0PJX8 343 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 H7C1Q1 480 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 SLC33A1O00400 549 aaPredicted RBP12.36□□□□□ -0.43
CCNE1-202ENST00000357943 HSPB6O14558 160 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 DVL1O14640 695 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 DEGS1O15121 323 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 TMEM127O75204 238 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 ZNF737O75373 536 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 LMO1P25800 156 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 SOX6P35712 828 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 MPV17LQ2QL34 196 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 SIGIRRQ6IA17 410 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 LINC00299Q6ZSB3 139 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 NLRC3Q7RTR2 1065 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 ASCC1Q8N9N2 400 aaKnown RBP12.36□□□□□ -0.43
CCNE1-202ENST00000357943 MCFD2Q8NI22 146 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 RAB39BQ96DA2 213 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 CHST6Q9GZX3 395 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 SHARPINQ9H0F6 387 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 SEBOXQ9HB31 216 aaPredicted RBP12.36□□□□□ -0.43
CCNE1-202ENST00000357943 SPATA2Q9UM82 520 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 MED13LQ71F56 2210 aa12.36□□□□□ -0.43
CCNE1-202ENST00000357943 FAM157AC9JC47 383 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 PHF1O43189 567 aaPredicted RBP12.35□□□□□ -0.43
CCNE1-202ENST00000357943 TK1P04183 234 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 RAB6AP20340 208 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 CPT2P23786 658 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 PITPNBP48739 271 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 SCAND1P57086 179 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 LINC00596Q86U02 117 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 TMEM185AQ8NFB2 350 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 PTX4Q96A99 478 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
CCNE1-202ENST00000357943 MED30Q96HR3 178 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 URM1Q9BTM9 101 aaKnown RBP12.35□□□□□ -0.43
CCNE1-202ENST00000357943 MRI1Q9BV20 369 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 MMP27Q9H306 513 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 COMMD3Q9UBI1 195 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 CLN8Q9UBY8 286 aa12.35□□□□□ -0.43
CCNE1-202ENST00000357943 K7N7A8 449 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 SMAD7O15105 426 aaKnown RBP12.34□□□□□ -0.43
CCNE1-202ENST00000357943 SOCS1O15524 211 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 ZFP36P26651 326 aaKnown RBP12.34□□□□□ -0.43
CCNE1-202ENST00000357943 VEGFCP49767 419 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 GNB2P62879 340 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 MOGAT2Q3SYC2 334 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 ATAD3CQ5T2N8 411 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 WDR25Q64LD2 544 aaPredicted RBP12.34□□□□□ -0.43
CCNE1-202ENST00000357943 RTN4RL2Q86UN3 420 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 BPIFB2Q8N4F0 458 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 FAM89BQ8N5H3 189 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 OR4S1Q8NGB4 309 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 SLC25A38Q96DW6 304 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 SNX22Q96L94 193 aa12.34□□□□□ -0.43
CCNE1-202ENST00000357943 SSBP3Q9BWW4 388 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms