RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ID1P41134 155 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 FAM27D1Q5T7N8 215 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 ZNF774Q6NX45 483 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 OR13F1Q8NGS4 319 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 APOBEC4Q8WW27 367 aaKnown RBP15.39■□□□□ 0.05
COL27A1-201ENST00000356083 HGDQ93099 445 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 TMEM38AQ9H6F2 299 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 SLC38A11Q08AI6 406 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 DHRS7CA6NNS2 312 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 PPICP45877 212 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 CD226Q15762 336 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 DDB2Q92466 427 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 FGF14Q92915 247 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 DERL3Q96Q80 235 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 MON2Q7Z3U7 1717 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 MFSD2BA6NFX1 497 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 UBE2L3P68036 154 aaKnown RBP15.39■□□□□ 0.05
COL27A1-201ENST00000356083 BAK1Q16611 211 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 COL5A1-AS1Q5SY13 56 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 CACNG5Q9UF02 275 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 MBLAC1A4D2B0 266 aaPredicted RBP15.38■□□□□ 0.05
COL27A1-201ENST00000356083 RAF1P04049 648 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 PRSS2P07478 247 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 PTGFRP43088 359 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 EBLN2Q6P2I7 272 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 OR4B1Q8NGF8 309 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 KLK11Q9UBX7 282 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 TRAV20A0A0B4J274 112 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 TMEM218A2RU14 115 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 IGHA1P01876 353 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 IGHA2P01877 340 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 OR5C1Q8NGR4 320 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 ASB13Q8WXK3 278 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 ANXA10Q9UJ72 324 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 OR10D3Q8NH80 312 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 AQP6Q13520 282 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 GPNMBQ14956 572 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 TMEM52BQ4KMG9 183 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 OR10D4PQ8NGN7 298 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 SSMEM1Q8WWF3 244 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 C4orf45Q96LM5 186 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 HTN3P15516 51 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 KCNJ3P48549 501 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 OR4C16Q8NGL9 310 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 C7orf72A4D263 438 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 OR4A47Q6IF82 309 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 OR6C3Q9NZP0 311 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 C1RLQ9NZP8 487 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 LRP12Q9Y561 859 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 MED13LQ71F56 2210 aa15.38■□□□□ 0.05
COL27A1-201ENST00000356083 PRSS44E7EML9 344 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 WNT3P56703 355 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 STAC2Q6ZMT1 411 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 MCHR2Q969V1 340 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 FBXL17Q9UF56 701 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 NSUN5P2Q63ZY6 315 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 HIST1H1EP10412 219 aaKnown RBP15.37■□□□□ 0.05
COL27A1-201ENST00000356083 CD81P60033 236 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 PIK3IP1Q96FE7 263 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 ARHGAP5-AS1Q96IT6 56 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 ZNF552Q9H707 407 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-201ENST00000356083 RER1O15258 196 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 P01737 135 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 C19orf48Q6RUI8 117 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 AUNIPQ9H7T9 357 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 FUT3P21217 361 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 GPR3P46089 330 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 PHYHIPQ92561 330 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 MS4A10Q96PG2 267 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 SIAH2O43255 324 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 DHHO43323 396 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 STAG3L2P0CL84 134 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 LYG2Q86SG7 212 aa15.37■□□□□ 0.05
COL27A1-201ENST00000356083 KCNE3Q9Y6H6 103 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 CST4P01036 141 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 KISS1Q15726 138 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 FAM78BQ5VT40 261 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 NANOGP1Q8N7R0 232 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 A0A1W2PPC4 97 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 FZD5Q13467 585 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 IL11RAQ14626 422 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 GCSAMLQ5JQS6 135 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 SAXO2Q658L1 398 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 SMIM19Q96E16 107 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 DCTN5Q9BTE1 182 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 SLC45A2Q9UMX9 530 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 PSG5Q15238 335 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 Q8IYB0 196 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 HLXQ14774 488 aaPredicted RBP15.36■□□□□ 0.05
COL27A1-201ENST00000356083 C16orf82Q7Z2V1 217 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 C6orf201Q7Z4U5 140 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 C19orf53Q9UNZ5 99 aaPredicted RBP15.36■□□□□ 0.05
COL27A1-201ENST00000356083 SPTAN1Q13813 2472 aaKnown RBP15.36■□□□□ 0.05
COL27A1-201ENST00000356083 MYLKQ15746 1914 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 A1L4Q6 167 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 CAPZBP47756 277 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 NUFIP2Q7Z417 695 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms