RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 RAB3BP20337 219 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 GABRR1P24046 479 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 RBM11P57052 281 aaKnown RBP13.84□□□□□ -0.19
SFN-201ENST00000339276 SCN1BQ07699 218 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 IL13RA2Q14627 380 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 P2RY14Q15391 338 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 CR1LQ2VPA4 569 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 C17orf107Q6ZR85 190 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 NR2C2APQ86WQ0 139 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 TMEM104Q8NE00 496 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 SLC25A28Q96A46 364 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 KCTD7Q96MP8 289 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 DCTN5Q9BTE1 182 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 TMPRSS13Q9BYE2 586 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 CHST6Q9GZX3 395 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 BANF2Q9H503 90 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 ZNF581Q9P0T4 197 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 RPUSD1Q9UJJ7 312 aaKnown RBP13.84□□□□□ -0.19
SFN-201ENST00000339276 ST3GAL6Q9Y274 331 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 HIVEP2P31629 2446 aa13.84□□□□□ -0.19
SFN-201ENST00000339276 NSD1Q96L73 2696 aaPredicted RBP13.83□□□□□ -0.2
SFN-201ENST00000339276 GPR37O15354 613 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 ENSAO43768 121 aaKnown RBP13.83□□□□□ -0.2
SFN-201ENST00000339276 AIREO43918 545 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 CRTAPO75718 401 aaPredicted RBP13.83□□□□□ -0.2
SFN-201ENST00000339276 ECDO95905 644 aaPredicted RBP13.83□□□□□ -0.2
SFN-201ENST00000339276 TFAP2AP05549 437 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 GTF2F2P13984 249 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 GATA3P23771 443 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 TGFBR1P36897 503 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 CLDN12P56749 244 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 GPR176Q14439 515 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 TIMM50Q3ZCQ8 353 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 NHLRC3Q5JS37 347 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 HES5Q5TA89 166 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 OR10K2Q6IF99 312 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 METAP1DQ6UB28 335 aaPredicted RBP13.83□□□□□ -0.2
SFN-201ENST00000339276 BTNL3Q6UXE8 466 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 IL17RELQ6ZVW7 336 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 FAM46BQ96A09 425 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 SNX22Q96L94 193 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 FUNDC2Q9BWH2 189 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 SHARPINQ9H0F6 387 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 FAM234AQ9H0X4 552 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 PCDHB16Q9NRJ7 776 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 GHRLQ9UBU3 117 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 WNK2Q9Y3S1 2297 aa13.83□□□□□ -0.2
SFN-201ENST00000339276 SONP18583 2426 aaKnown RBP13.83□□□□□ -0.2
SFN-201ENST00000339276 KIR2DS1A0A191URI9 304 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 SLC33A1O00400 549 aaPredicted RBP13.82□□□□□ -0.2
SFN-201ENST00000339276 GEMIN2O14893 280 aaKnown RBP13.82□□□□□ -0.2
SFN-201ENST00000339276 DEGS1O15121 323 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 AVPP01185 164 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 UBBP0CG47 229 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 VSIG8P0DPA2 414 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 MGMTP16455 207 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 SDC2P34741 201 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 OR3A1P47881 315 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 ALDH3B2P48448 385 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 LSM3P62310 102 aaKnown RBP13.82□□□□□ -0.2
SFN-201ENST00000339276 GRK1Q15835 563 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 RAB11BQ15907 218 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 FAM120AOSQ5T036 256 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 OR8H2Q8N162 312 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 OR4S1Q8NGB4 309 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 OR4M1Q8NGD0 313 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 CST11Q9H112 138 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 C7orf69Q9H7B7 122 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 C19orf12Q9NSK7 152 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 TMEM160Q9NX00 188 aa13.82□□□□□ -0.2
SFN-201ENST00000339276 A0A0G2JK05 382 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 J3QLI3 93 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 HSPB6O14558 160 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 OR7C1O76099 320 aaPredicted RBP13.81□□□□□ -0.2
SFN-201ENST00000339276 BPNT1O95861 308 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 CLEC2LP0C7M8 214 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 LMO1P25800 156 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 PSMD7P51665 324 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 MXD1Q05195 221 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 PAX8Q06710 450 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 UNC119Q13432 240 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 EDDM3AQ14507 147 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 TAF9Q16594 264 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 GDPGP1Q6ZNW5 385 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 C1orf229Q6ZS94 237 aaPredicted RBP13.81□□□□□ -0.2
SFN-201ENST00000339276 CHST4Q8NCG5 386 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 LY6G5BQ8NDX9 201 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 C8orf46Q8TAG6 207 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 SELENOIQ9C0D9 397 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 PPA2Q9H2U2 334 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 OPN4Q9UHM6 478 aa13.81□□□□□ -0.2
SFN-201ENST00000339276 FN1P02751 2386 aaKnown RBP13.81□□□□□ -0.2
SFN-201ENST00000339276 TRAV24A0A0B4J272 114 aa13.8□□□□□ -0.2
SFN-201ENST00000339276 A0A1W2PQ09 198 aa13.8□□□□□ -0.2
SFN-201ENST00000339276 IFITM5A6NNB3 132 aa13.8□□□□□ -0.2
SFN-201ENST00000339276 MPIG6BO95866 241 aa13.8□□□□□ -0.2
SFN-201ENST00000339276 PPIAL4GP0DN37 164 aa13.8□□□□□ -0.2
SFN-201ENST00000339276 ARSBP15848 533 aa13.8□□□□□ -0.2
SFN-201ENST00000339276 EDDM3BP56851 147 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms