RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 KCNE3Q9Y6H6 103 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 COMPP49747 757 aaPredicted RBP11.62□□□□□ -0.55
HLCS-201ENST00000336648 GABRA6Q16445 453 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 PRICKLE4Q2TBC4 344 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 PRSS36Q5K4E3 855 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 SPATA46Q5T0L3 261 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 RAB1CQ92928 201 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 TRMT61AQ96FX7 289 aaKnown RBP11.62□□□□□ -0.55
HLCS-201ENST00000336648 ARRDC1-AS1Q9H2J1 176 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 CLEC5AQ9NY25 188 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 A0A1W2PQD3 144 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 PCP4P48539 62 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 RAB32Q13637 225 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 TSPAN32Q96QS1 320 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 RAB1BQ9H0U4 201 aa11.62□□□□□ -0.55
HLCS-201ENST00000336648 BRS3P32247 399 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 RAE1P78406 368 aaKnown RBP11.61□□□□□ -0.55
HLCS-201ENST00000336648 TNFAIP6P98066 277 aaPredicted RBP11.61□□□□□ -0.55
HLCS-201ENST00000336648 PABPC1L2AQ5JQF8 200 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 TMEM215Q68D42 235 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 HMGCLL1Q8TB92 370 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 COL25A1Q9BXS0 654 aaPredicted RBP11.61□□□□□ -0.55
HLCS-201ENST00000336648 SRD5A3Q9H8P0 318 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 GABRG2P18507 467 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 UQCRFS1P47985 274 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 LSM6P62312 80 aaKnown RBP11.61□□□□□ -0.55
HLCS-201ENST00000336648 AESQ08117 197 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 BSXQ3C1V8 233 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 ZBTB34Q8NCN2 500 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 C1RLQ9NZP8 487 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 SEMG1P04279 462 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 RNF224P0DH78 156 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 GABRA1P14867 456 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 ZNF32P17041 273 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 COL19A1Q14993 1142 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 LRRC29Q8WV35 223 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 MYH4Q9Y623 1939 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 TRAV38-1A0A0B4J264 116 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 PLPP3O14495 311 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 SP6Q3SY56 376 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 PDPNQ86YL7 162 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 D2HGDHQ8N465 521 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 NUBPLQ8TB37 319 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 ORAI1Q96D31 301 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 TM4SF19Q96DZ7 209 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 RBFOX3A6NFN3 312 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 MFNGO00587 321 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 WNT3P56703 355 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 FOXO1Q12778 655 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 AWAT1Q58HT5 328 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 GPBAR1Q8TDU6 330 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 SLC26A1Q9H2B4 701 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 SIRT7Q9NRC8 400 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 PIPOXQ9P0Z9 390 aa11.61□□□□□ -0.55
HLCS-201ENST00000336648 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
HLCS-201ENST00000336648 B4E171 279 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 CA11O75493 328 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 OR4A8P0C604 315 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 CA6P23280 308 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 ACER2Q5QJU3 275 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 XAF1Q6GPH4 301 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 TRILQ7L0X0 811 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 OR10G8Q8NGN5 311 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 OR1N2Q8NGR9 330 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 SIRT5Q9NXA8 310 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 SOX21Q9Y651 276 aaPredicted RBP11.6□□□□□ -0.55
HLCS-201ENST00000336648 SSC5DA1L4H1 1573 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 TSPAN13O95857 204 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 PGFP49763 221 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 FOXQ1Q9C009 403 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 WNT16Q9UBV4 365 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 PAM16Q9Y3D7 125 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 NPTNQ9Y639 398 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 IGSF23A1L1A6 192 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 DNASE2O00115 360 aaPredicted RBP11.6□□□□□ -0.55
HLCS-201ENST00000336648 MT-CO3P00414 261 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 CD226Q15762 336 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 LINC00596Q86U02 117 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 OR8A1Q8NGG7 326 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 ADAT3Q96EY9 351 aaPredicted RBP11.6□□□□□ -0.55
HLCS-201ENST00000336648 SNX22Q96L94 193 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 TRDCB7Z8K6 153 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 K7ESF4 209 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 SLC25A30Q5SVS4 291 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 GPA33Q99795 319 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 SLC25A33Q9BSK2 321 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 FBXL17Q9UF56 701 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
HLCS-201ENST00000336648 ISXQ2M1V0 245 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 ASCL5Q7RTU5 278 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 OR4D9Q8NGE8 314 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 RPS4Y2Q8TD47 263 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 STARD10Q9Y365 291 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 DHRS7CA6NNS2 312 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 RER1O15258 196 aa11.59□□□□□ -0.55
HLCS-201ENST00000336648 KIAA0040Q15053 153 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms