RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 C2orf72A6NCS6 295 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 PRR33A8MZF0 331 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 TIA1P31483 386 aaKnown RBP eCLIP7.54□□□□□ -1.2
TDP1-201ENST00000335725 GLB1LQ6UWU2 654 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 MRGPRGQ86SM5 289 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 YRDCQ86U90 279 aaKnown RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 MEX3DQ86XN8 651 aaKnown RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 DOLPP1Q86YN1 238 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ZIC4Q8N9L1 334 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 LRRC61Q9BV99 259 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ZNF391Q9UJN7 358 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 UFC1Q9Y3C8 167 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 DUXBA0A1W2PPF3 345 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 RCBTB2O95199 551 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 IFNA1P01562 189 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 TTRP02766 147 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 MANFP55145 182 aaKnown RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 ZFP36L1Q07352 338 aaKnown RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 CEACAM21Q3KPI0 293 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ALG10Q5BKT4 473 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 STUMQ69YW2 141 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 PLXDC2Q6UX71 529 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
TDP1-201ENST00000335725 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 BAGE2Q86Y30 109 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 SMIM20Q8N5G0 67 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 FNDC9Q8TBE3 224 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 RNF128Q8TEB7 428 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 NEURL3Q96EH8 262 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 C1orf123Q9NWV4 160 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 SLC17A4Q9Y2C5 497 aa7.54□□□□□ -1.2
TDP1-201ENST00000335725 COL11A1P12107 1806 aaPredicted RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 DPRXA6NFQ7 191 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 C17orf112F2Z3M2 114 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 NUPR1O60356 82 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 TACSTD2P09758 323 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 EPORP19235 508 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 GNG4P50150 75 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 ZNF83P51522 516 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 FFAR4Q5NUL3 377 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CDCP2Q5VXM1 449 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 UFSP1Q6NVU6 142 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CYP2G1PQ6ZSU1 146 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 HOGA1Q86XE5 327 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 OR4F17Q8NGA8 305 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 OR13G1Q8NGZ3 307 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 GNPNAT1Q96EK6 184 aaPredicted RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 OR4F4Q96R69 305 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 SPATA25Q9BR10 227 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 AGMATQ9BSE5 352 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 RTBDNQ9BSG5 229 aaPredicted RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 SH3BGRL3Q9H299 93 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 MMP25Q9NPA2 562 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 KCNIP1Q9NZI2 227 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 VDAC3Q9Y277 283 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 LSM5Q9Y4Y9 91 aaKnown RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 COL5A2P05997 1499 aaPredicted RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 ZNF236Q9UL36 1845 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 FITM1A5D6W6 292 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 HELTA6NFD8 242 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CPSF4LA6NMK7 179 aaKnown RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 CLDN5O00501 218 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 GPR182O15218 404 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CLDN1O95832 211 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 REG1AP05451 166 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CRISP2P16562 243 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 EFNB2P52799 333 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 ZNF385BQ569K4 471 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 C1QL3Q5VWW1 255 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 FA2HQ7L5A8 372 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 PLPP7Q8NBV4 271 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 B3GALT1Q9Y5Z6 326 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CD55P08174 381 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 DBHP09172 617 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 LAMP2P13473 410 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 ADRA2CP18825 462 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CCR2P41597 374 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 RRADP55042 308 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 HSPB3Q12988 150 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 CSNK1A1LQ8N752 337 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 ZFP62Q8NB50 900 aaPredicted RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 MARCH1Q8TCQ1 289 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 ZNF418Q8TF45 676 aaPredicted RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 UHRF2Q96PU4 802 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 WDR54Q9H977 334 aa7.53□□□□□ -1.2
TDP1-201ENST00000335725 MRM2Q9UI43 246 aaKnown RBP7.53□□□□□ -1.2
TDP1-201ENST00000335725 RAMP2O60895 175 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 AMTP48728 403 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 ATP5J2P56134 94 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 RPL15P61313 204 aaKnown RBP7.52□□□□□ -1.21
TDP1-201ENST00000335725 OR10V1Q8NGI7 309 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 BLNKQ8WV28 456 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 TIMM29Q9BSF4 260 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 SPANXA1Q9NS26 97 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 EHFQ9NZC4 300 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 JKAMPQ9P055 326 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 ICAM5Q9UMF0 924 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 SSC5DA1L4H1 1573 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 PLXND1Q9Y4D7 1925 aa7.52□□□□□ -1.21
TDP1-201ENST00000335725 CCDC88CQ9P219 2028 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms