RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TTRP02766 147 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 SLC25A4P12235 298 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 EPHA8P29322 1005 aaPredicted RBP13.42□□□□□ -0.26
VARS2-201ENST00000321897 PMP22Q01453 160 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 PMS2P11Q13670 270 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 ZNF880Q6PDB4 577 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 ABHD3Q8WU67 409 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 WFIKKN1Q96NZ8 548 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 TXN2Q99757 166 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 RNF150Q9ULK6 438 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 LOXL2Q9Y4K0 774 aa13.42□□□□□ -0.26
VARS2-201ENST00000321897 PLXNA3P51805 1871 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 SEC14L6B5MCN3 397 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 IGHV3-13P01766 116 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 IGHV3-7P01780 117 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 OR5AC1P0C628 307 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 ERVS71-1P61550 626 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 DLK1P80370 383 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 SCARF2Q96GP6 870 aaPredicted RBP13.41□□□□□ -0.26
VARS2-201ENST00000321897 TRAV34A0A0B4J273 112 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 COL19A1Q14993 1142 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 ZNF385CQ66K41 422 aaPredicted RBP13.41□□□□□ -0.26
VARS2-201ENST00000321897 CATSPERDQ86XM0 798 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 BAGE3Q86Y29 109 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 BAGE2Q86Y30 109 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 ADIPOR1Q96A54 375 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 ATG101Q9BSB4 218 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 IGHV5-10-1A0A0J9YXX1 117 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 H0YL77 283 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 CLDN1O95832 211 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 GPM6AP51674 278 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.41□□□□□ -0.26
VARS2-201ENST00000321897 ETFRF1Q6IPR1 90 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 ZNF808Q8N4W9 903 aaPredicted RBP13.41□□□□□ -0.26
VARS2-201ENST00000321897 LHX4Q969G2 390 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 ALX4Q9H161 411 aaPredicted RBP13.41□□□□□ -0.26
VARS2-201ENST00000321897 WNT16Q9UBV4 365 aa13.41□□□□□ -0.26
VARS2-201ENST00000321897 H3BQ15 152 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 WISP1O95388 367 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 FPR2P25090 351 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 MST1P26927 711 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 PPP1CCP36873 323 aaKnown RBP13.4□□□□□ -0.26
VARS2-201ENST00000321897 NHLH2Q02577 135 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 LY6G6FQ5SQ64 297 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 ZNF787Q6DD87 383 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 TMPRSS7Q7RTY8 843 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 DTWD2Q8NBA8 298 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 CADM4Q8NFZ8 388 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 OR5C1Q8NGR4 320 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 FAM103A1Q9BTL3 118 aaKnown RBP13.4□□□□□ -0.26
VARS2-201ENST00000321897 SERTAD4Q9NUC0 356 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 OSGIN2Q9Y236 505 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 A0A1W2PPE3 182 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 GABRA2P47869 451 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 BCO1Q9HAY6 547 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
VARS2-201ENST00000321897 INTS1Q8N201 2190 aaKnown RBP13.4□□□□□ -0.26
VARS2-201ENST00000321897 A0A1W2PNV4 684 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 SIRPB1O00241 398 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 SPANXN5Q5MJ07 72 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 FOXB1Q99853 325 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 NECAP2Q9NVZ3 263 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 P4HTMQ9NXG6 502 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 PPP1R3CQ9UQK1 317 aa13.4□□□□□ -0.26
VARS2-201ENST00000321897 TSPAN2O60636 221 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 FBP1P09467 338 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 PAX6P26367 422 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 HABP2Q14520 560 aaPredicted RBP13.39□□□□□ -0.27
VARS2-201ENST00000321897 TIPARPQ7Z3E1 657 aaKnown RBP13.39□□□□□ -0.27
VARS2-201ENST00000321897 XKRY2A2RUG3 117 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 GSTP1P09211 210 aaKnown RBP13.39□□□□□ -0.27
VARS2-201ENST00000321897 EFNB1P98172 346 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 MRPL49Q13405 166 aaKnown RBP13.39□□□□□ -0.27
VARS2-201ENST00000321897 FZR1Q9UM11 496 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 PIEZO2Q9H5I5 2752 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 OR5H1A6NKK0 313 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 CDC14BO60729 498 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 IL2RGP31785 369 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 EXT1Q16394 746 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 ALKBH6Q3KRA9 238 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 IL22RA2Q969J5 263 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 SLC17A5Q9NRA2 495 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 SPG11Q96JI7 2443 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 A0A1W2PQM1 296 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 NXPH2O95156 264 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 TBPP20226 339 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 RPL19P84098 196 aaKnown RBP13.39□□□□□ -0.27
VARS2-201ENST00000321897 RUNX1Q01196 453 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 MPV17LQ2QL34 196 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 TOMM20LQ6UXN7 152 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 LYZL2Q7Z4W2 148 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 RARRES2Q99969 163 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 AURKAIP1Q9NWT8 199 aaPredicted RBP13.39□□□□□ -0.27
VARS2-201ENST00000321897 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 HDGFL3Q9Y3E1 203 aa13.39□□□□□ -0.27
VARS2-201ENST00000321897 RBFOX3A6NFN3 312 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 ZNF814B7Z6K7 855 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 MS4A18H0YCH9 400 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 PCBD1P61457 104 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms