RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 EXTL1Q92935 676 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 ESRP2Q9H6T0 727 aaKnown RBP11.85□□□□□ -0.51
HPS3-201ENST00000296051 PPP1R3CQ9UQK1 317 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 PLXNB2O15031 1838 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 HSPB2A8KAH6 182 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 TMEM127O75204 238 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 OR2A4O95047 310 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 PATE4P0C8F1 98 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 GALNSP34059 522 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 HAAOP46952 286 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 SULT1A1P50225 295 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 ZNF92Q03936 586 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 HSPB2Q16082 182 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 LRP11Q86VZ4 500 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 OR8U1Q8NH10 309 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
HPS3-201ENST00000296051 SLC25A28Q96A46 364 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 OR2A7Q96R45 310 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 SOSTQ9BQB4 213 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 PIEZO1Q92508 2521 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 TNFRSF1AP19438 455 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 RAB5AP20339 215 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 TAS2R30P59541 319 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 POLR2GP62487 172 aaKnown RBP eCLIP11.84□□□□□ -0.51
HPS3-201ENST00000296051 RAC1P63000 192 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 ZNF787Q6DD87 383 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 BAGE3Q86Y29 109 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 BAGE2Q86Y30 109 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 OR5C1Q8NGR4 320 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 OR10X1Q8NGY0 326 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 ADAT3Q96EY9 351 aaPredicted RBP11.84□□□□□ -0.51
HPS3-201ENST00000296051 PLPPR2Q96GM1 343 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 HEXA-AS1Q9H8Q6 139 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 ALG1L2C9J202 215 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
HPS3-201ENST00000296051 UPK3AO75631 287 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 MT-CO2P00403 227 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 ZCCHC14Q8WYQ9 949 aaKnown RBP11.84□□□□□ -0.51
HPS3-201ENST00000296051 STRAPQ9Y3F4 350 aaKnown RBP11.84□□□□□ -0.51
HPS3-201ENST00000296051 DOCK8Q8NF50 2099 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 CTSBP07858 339 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 OR4F5Q8NH21 305 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 MEGF10Q96KG7 1140 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 OR4F4Q96R69 305 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 ARV1Q9H2C2 271 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 RSPO4Q2I0M5 234 aaPredicted RBP11.84□□□□□ -0.51
HPS3-201ENST00000296051 KCNIP4Q6PIL6 250 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 SAP25Q8TEE9 199 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
HPS3-201ENST00000296051 ICAM5Q9UMF0 924 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 HEATR5BQ9P2D3 2071 aa11.84□□□□□ -0.51
HPS3-201ENST00000296051 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.51
HPS3-201ENST00000296051 ARHGEF39Q8N4T4 335 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 FREM3P0C091 2139 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.52
HPS3-201ENST00000296051 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
HPS3-201ENST00000296051 SRPXP78539 464 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 ZNF573Q86YE8 665 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 AP1S3Q96PC3 154 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 HDHD3Q9BSH5 251 aaPredicted RBP11.83□□□□□ -0.52
HPS3-201ENST00000296051 CD3EP07766 207 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 CCL3P10147 92 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 PSMB3P49720 205 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 TMPRSS3P57727 454 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 ZNF66Q6ZN08 573 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 ETV3LQ6ZN32 361 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 ZNF426Q9BUY5 554 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 MED13LQ71F56 2210 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 SH2D1BO14796 132 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 OR4A16Q8NH70 328 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 POC1BQ8TC44 478 aa11.83□□□□□ -0.52
HPS3-201ENST00000296051 SAT2Q96F10 170 aaPredicted RBP11.83□□□□□ -0.52
HPS3-201ENST00000296051 HEYLQ9NQ87 328 aaPredicted RBP11.83□□□□□ -0.52
HPS3-201ENST00000296051 PLPP3O14495 311 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 DFFBO76075 338 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 CCL2P13500 99 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 ECI1P42126 302 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 SCAND1P57086 179 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 PDCD11Q14690 1871 aaKnown RBP11.82□□□□□ -0.52
HPS3-201ENST00000296051 GNPNAT1Q96EK6 184 aaPredicted RBP11.82□□□□□ -0.52
HPS3-201ENST00000296051 DNAH12Q6ZR08 3092 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 A8MXK9 166 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 B4E171 279 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 TSPAN7P41732 249 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 RPP30P78346 268 aaKnown RBP11.82□□□□□ -0.52
HPS3-201ENST00000296051 ZNF383Q8NA42 475 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 SNX22Q96L94 193 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 SLX1AQ9BQ83 275 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 ARHGEF17Q96PE2 2063 aaPredicted RBP11.82□□□□□ -0.52
HPS3-201ENST00000296051 RNF212BA8MTL3 300 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 SERPINE3A8MV23 424 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 SMIM6P0DI80 62 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 GAS1P54826 345 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 GNB1P62873 340 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 CSRP2Q16527 193 aa11.82□□□□□ -0.52
HPS3-201ENST00000296051 LYZL2Q7Z4W2 148 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms