RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 MUL1Q969V5 352 aa7.72□□□□□ -1.17
HMHB1-201ENST00000289448 FGGYQ96C11 551 aa7.72□□□□□ -1.17
HMHB1-201ENST00000289448 BORCS8Q96FH0 119 aa7.72□□□□□ -1.17
HMHB1-201ENST00000289448 CCDC90BQ9GZT6 254 aa7.72□□□□□ -1.17
HMHB1-201ENST00000289448 MMP27Q9H306 513 aa7.72□□□□□ -1.17
HMHB1-201ENST00000289448 RBFOX1Q9NWB1 397 aaKnown RBP7.72□□□□□ -1.17
HMHB1-201ENST00000289448 FBLN5Q9UBX5 448 aa7.72□□□□□ -1.17
HMHB1-201ENST00000289448 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMHB1-201ENST00000289448 RPL36Q9Y3U8 105 aaKnown RBP7.72□□□□□ -1.17
HMHB1-201ENST00000289448 CEPT1Q9Y6K0 416 aa7.72□□□□□ -1.17
HMHB1-201ENST00000289448 IGKV1-12A0A0C4DH73 117 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 A0A1W2PPH5 198 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 DAPL1A0PJW8 107 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 IRGMA1A4Y4 181 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 CCDC160A6NGH7 325 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 ODF3BA8MYP8 253 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 HAND1O96004 215 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 SERPINA3P01011 423 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 IGKV1D-12P01611 117 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 MT-ND2P03891 347 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 CDK1P06493 297 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 UBCP0CG48 685 aaKnown RBP7.71□□□□□ -1.18
HMHB1-201ENST00000289448 ZNF728P0DKX0 622 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 IGHV1-8P0DP01 117 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 ATF1P18846 271 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 KIR2DS4P43632 304 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 POU3F4P49335 361 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 EMX1Q04741 257 aaPredicted RBP7.71□□□□□ -1.18
HMHB1-201ENST00000289448 ZNF91Q05481 1191 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 EDDM3AQ14507 147 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 TBCEQ15813 527 aaPredicted RBP7.71□□□□□ -1.18
HMHB1-201ENST00000289448 PLA1AQ53H76 456 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 TMEM244Q5VVB8 128 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 UTS2BQ765I0 119 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 CCDC54Q8NEL0 328 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 DNAAF1Q8NEP3 725 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 OR4S1Q8NGB4 309 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 OR13F1Q8NGS4 319 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 FAM110DQ8TAY7 271 aaPredicted RBP7.71□□□□□ -1.18
HMHB1-201ENST00000289448 PP6455Q8WZ26 134 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 EMG1Q92979 244 aaKnown RBP7.71□□□□□ -1.18
HMHB1-201ENST00000289448 C10orf35Q96D05 121 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 LGALS12Q96DT0 336 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 PELI1Q96FA3 418 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 SNX22Q96L94 193 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 ZNF649Q9BS31 505 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 CHST6Q9GZX3 395 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 AMBNQ9NP70 447 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 RSL24D1Q9UHA3 163 aaKnown RBP7.71□□□□□ -1.18
HMHB1-201ENST00000289448 FOXJ3Q9UPW0 622 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 DSCAML1Q8TD84 2053 aa7.71□□□□□ -1.18
HMHB1-201ENST00000289448 TRBV2A0A0J9YWF9 115 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 hCG_1809904A0A1W2PP81 198 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 A0A1W2PPE2 198 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 A0A1W2PR64 198 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 A0A1W2PRV1 198 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 OR4C45A6NMZ5 311 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 VGLL3A8MV65 326 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 E9PI62 339 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 J3QLW9 94 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 MMP23AO75900 390 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 FADS2O95864 444 aaKnown RBP7.7□□□□□ -1.18
HMHB1-201ENST00000289448 RBP4P02753 201 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ARG1P05089 322 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ISG15P05161 165 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ZNF19P17023 458 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 AZGP1P25311 298 aaKnown RBP7.7□□□□□ -1.18
HMHB1-201ENST00000289448 DCKP27707 260 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 OR3A1P47881 315 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 RBP2P50120 134 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ATP1B3P54709 279 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 SNU13P55769 128 aaKnown RBP7.7□□□□□ -1.18
HMHB1-201ENST00000289448 MTCP1P56278 107 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 LGALS4P56470 323 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ACTC1P68032 377 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ACTA1P68133 377 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 MEF2CQ06413 473 aaPredicted RBP7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ST3GAL4Q11206 333 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 PDZK1IP1Q13113 114 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 HABP2Q14520 560 aaPredicted RBP7.7□□□□□ -1.18
HMHB1-201ENST00000289448 IRF3Q14653 427 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 HERPUD1Q15011 391 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ZNF146Q15072 292 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 CNN3Q15417 329 aaKnown RBP7.7□□□□□ -1.18
HMHB1-201ENST00000289448 CNPY1Q3B7I2 92 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 SYT6Q5T7P8 510 aaPredicted RBP7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ZNF626Q68DY1 528 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 BAIAP2L2Q6UXY1 529 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 GDPD3Q7L5L3 318 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 FAM220AQ7Z4H9 259 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 KCTD20Q7Z5Y7 419 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 FAM58AQ8N1B3 248 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 STX19Q8N4C7 294 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 C11orf44Q8N8P7 122 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 OR11H6Q8NGC7 330 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 RFT1Q96AA3 541 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 C4orf36Q96KX1 117 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 SPACA5Q96QH8 159 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 CDCA4Q9BXL8 241 aa7.7□□□□□ -1.18
HMHB1-201ENST00000289448 ZNF702PQ9H963 129 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms