RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 METAP1DQ6UB28 335 aaPredicted RBP14.35□□□□□ -0.11
SKP2-201ENST00000274254 LYPD2Q6UXB3 125 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 MCFD2Q8NI22 146 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 GAFA1Q96PS6 74 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 CCL13Q99616 98 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 GAL3ST1Q99999 423 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 ZNF665Q9H7R5 613 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 RCC2Q9P258 522 aaKnown RBP14.35□□□□□ -0.11
SKP2-201ENST00000274254 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 MAB21L2Q9Y586 359 aa14.35□□□□□ -0.11
SKP2-201ENST00000274254 MED13LQ71F56 2210 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 METTL21EPA6NDL7 271 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 RAB27BO00194 218 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 CTDSP2O14595 271 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 DEGS1O15121 323 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 SIGLEC5O15389 551 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 TMPRSS2O15393 492 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 ZNF737O75373 536 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 CHRM2P08172 466 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 GABRR1P24046 479 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 COL10A1Q03692 680 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 CMTM4Q8IZR5 234 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 ZNF561Q8N587 486 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 CHST4Q8NCG5 386 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 MMP27Q9H306 513 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 CTSZQ9UBR2 303 aa14.34□□□□□ -0.11
SKP2-201ENST00000274254 MYO9AB2RTY4 2548 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 MAP1AP78559 2803 aaPredicted RBP14.33□□□□□ -0.12
SKP2-201ENST00000274254 MALRD1Q5VYJ5 2156 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 A0A096LNT2 108 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 TRAV24A0A0B4J272 114 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 IGHV4-61A0A0C4DH41 118 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 A0A1B0GW55 424 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 NKX6-3A6NJ46 265 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 SLC33A1O00400 549 aaPredicted RBP14.33□□□□□ -0.12
SKP2-201ENST00000274254 SOCS1O15524 211 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 ADAM20O43506 726 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 HPGDSO60760 199 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 APOA1P02647 267 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4L2P0CJ85 424 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4L3P0CJ86 424 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4L4P0CJ87 422 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4L5P0CJ88 424 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4L6P0CJ89 424 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4L7P0CJ90 424 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 ZNF44P15621 663 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 VEGFCP49767 419 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 IL13RA1P78552 427 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 MOGAT2Q3SYC2 334 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4L9Q6RFH8 374 aaPredicted RBP14.33□□□□□ -0.12
SKP2-201ENST00000274254 SLC36A1Q7Z2H8 476 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 FAM216BQ8N7L0 139 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 OR56B1Q8NGI3 324 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 RAB40AQ8WXH6 277 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 C6orf62Q9GZU0 229 aaPredicted RBP14.33□□□□□ -0.12
SKP2-201ENST00000274254 ATG5Q9H1Y0 275 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 MIXL1Q9H2W2 232 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 NARFLQ9H6Q4 476 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 PATZ1Q9HBE1 687 aaKnown RBP14.33□□□□□ -0.12
SKP2-201ENST00000274254 DUX4Q9UBX2 424 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 MIOXQ9UGB7 285 aa14.33□□□□□ -0.12
SKP2-201ENST00000274254 DOCK11Q5JSL3 2073 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 TMEM82A0PJX8 343 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 F5H0A9 414 aaPredicted RBP14.32□□□□□ -0.12
SKP2-201ENST00000274254 H3BUI4 141 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 SIRPB1O00241 398 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 PSPNO60542 156 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 FCN3O75636 299 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 EIF4EP06730 217 aaKnown RBP14.32□□□□□ -0.12
SKP2-201ENST00000274254 WNT2P09544 360 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 SELLP14151 372 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 CHATP28329 748 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 PITPNBP48739 271 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 TMEM50BP56557 158 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 SCN1BQ07699 218 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 C17orf107Q6ZR85 190 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 ZNRF1Q8ND25 227 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 CLDND2Q8NHS1 167 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 MED30Q96HR3 178 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 Q96MF0 132 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 SHARPINQ9H0F6 387 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 SPACA1Q9HBV2 294 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 CREBBPQ92793 2442 aa14.32□□□□□ -0.12
SKP2-201ENST00000274254 K7N7A8 449 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 PDCD6O75340 191 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 SCGNO76038 276 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 IGHV2-5P01817 119 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 RPS2P15880 293 aaKnown RBP14.31□□□□□ -0.12
SKP2-201ENST00000274254 ELK1P19419 428 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 FUT3P21217 361 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 BLVRBP30043 206 aaPredicted RBP14.31□□□□□ -0.12
SKP2-201ENST00000274254 LMO4P61968 165 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 RAB12Q6IQ22 244 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 ZNF841Q6ZN19 808 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 LAX1Q8IWV1 398 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 WFDC11Q8NEX6 87 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 OR10R2Q8NGX6 335 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 NEIL1Q96FI4 390 aaPredicted RBP14.31□□□□□ -0.12
SKP2-201ENST00000274254 SNX22Q96L94 193 aa14.31□□□□□ -0.12
SKP2-201ENST00000274254 NUDT16L1Q9BRJ7 211 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms