RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ZNRF1Q8ND25 227 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 SMR3AQ99954 134 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 ZNF665Q9H7R5 613 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 LPAR2Q9HBW0 351 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 CEPT1Q9Y6K0 416 aa11.36□□□□□ -0.59
NEK3-210ENST00000620675 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.59
NEK3-210ENST00000620675 IFITM5A6NNB3 132 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 TMPRSS2O15393 492 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 WNT2P09544 360 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 ZFP36P26651 326 aaKnown RBP11.35□□□□□ -0.59
NEK3-210ENST00000620675 SERPINB10P48595 397 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 QRFPP83859 136 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 IKZF1Q13422 519 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 BLMHQ13867 455 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 SPCS2Q15005 226 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 DGUOKQ16854 277 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 ZNF841Q6ZN19 808 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 TBC1D15Q8TC07 691 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 CPNE2Q96FN4 548 aaPredicted RBP11.35□□□□□ -0.59
NEK3-210ENST00000620675 BARHL1Q9BZE3 327 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 METTL9Q9H1A3 318 aa11.35□□□□□ -0.59
NEK3-210ENST00000620675 PATZ1Q9HBE1 687 aaKnown RBP11.35□□□□□ -0.59
NEK3-210ENST00000620675 F5H0A9 414 aaPredicted RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 PAHP00439 452 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 RPS2P15880 293 aaKnown RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 PRDX2P32119 198 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 FGF12P61328 243 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 RAB11BQ15907 218 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 ELP2Q6IA86 826 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 SFXN4Q6P4A7 337 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 ZNF788Q6ZQV5 615 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 DCDC5Q6ZRR9 648 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 BIVMQ86UB2 503 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 MUC20Q8N307 709 aaPredicted RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 Q8NFD4 153 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 OR6M1Q8NGM8 313 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 RASL12Q9NYN1 266 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 IL36GQ9NZH8 169 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 DAPK2Q9UIK4 370 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 PCDHB10Q9UN67 800 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 PDCD5O14737 125 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 GEMIN2O14893 280 aaKnown RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 CRTAPO75718 401 aaPredicted RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 FSTL3O95633 263 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 KNG1P01042 644 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 EFNB2P52799 333 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 SCN1BQ07699 218 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 ZNF146Q15072 292 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 C2orf76Q3KRA6 126 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 Q6P435 159 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 SPICQ8N5J4 248 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 ISOC1Q96CN7 298 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 FOXRED1Q96CU9 486 aaPredicted RBP11.34□□□□□ -0.59
NEK3-210ENST00000620675 COX4I2Q96KJ9 171 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 S100A13Q99584 98 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 NICN1Q9BSH3 213 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 CUBNO60494 3623 aa11.34□□□□□ -0.59
NEK3-210ENST00000620675 TMEM82A0PJX8 343 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 MEX3AA1L020 520 aaKnown RBP11.33□□□□□ -0.6
NEK3-210ENST00000620675 NOTOA8MTQ0 251 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 AIPO00170 330 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 SIRPB1O00241 398 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 DVL1O14640 695 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 PSPNO60542 156 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 MPIG6BO95866 241 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 HAND1O96004 215 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
NEK3-210ENST00000620675 MGMTP16455 207 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 COL10A1Q03692 680 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 KRTAP1-1Q07627 177 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 TAF9Q16594 264 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 TMEM249Q2WGJ8 235 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 ATPAF1Q5TC12 328 aaPredicted RBP11.33□□□□□ -0.6
NEK3-210ENST00000620675 BRICD5Q6PL45 260 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 TPRA1Q86W33 373 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 Q8IYB0 196 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 OR51T1Q8NGJ9 327 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 FAM3DQ96BQ1 224 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 C12orf43Q96C57 262 aaKnown RBP11.33□□□□□ -0.6
NEK3-210ENST00000620675 CHST6Q9GZX3 395 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 LIN7BQ9HAP6 207 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
NEK3-210ENST00000620675 A0A0A6YYD4 124 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 TMEM272A0A1B0GTI8 110 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 DPPA5A6NC42 116 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 KIAA1324LA8MWY0 1029 aaPredicted RBP11.32□□□□□ -0.6
NEK3-210ENST00000620675 H3BMQ9 156 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 OR2H2O95918 312 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 CSTBP04080 98 aaKnown RBP11.32□□□□□ -0.6
NEK3-210ENST00000620675 IGHV4-31P0DP07 118 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 ARSBP15848 533 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
NEK3-210ENST00000620675 LCN2P80188 198 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 FOXB2Q5VYV0 432 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 C17orf107Q6ZR85 190 aa11.32□□□□□ -0.6
NEK3-210ENST00000620675 SDSLQ96GA7 329 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms