RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FAM216BQ8N7L0 139 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 DYNC2LI1Q8TCX1 351 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 FAM3DQ96BQ1 224 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 CYYR1Q96J86 154 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 CCL13Q99616 98 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 GAL3ST1Q99999 423 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 NICN1Q9BSH3 213 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 DCUN1D5Q9BTE7 237 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 SELENOIQ9C0D9 397 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 CST11Q9H112 138 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 TMEM165Q9HC07 324 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 RASL12Q9NYN1 266 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 CTSZQ9UBR2 303 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 OR5V1Q9UGF6 321 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 ZNF222Q9UK12 451 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 MYO9AB2RTY4 2548 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 CR1P17927 2039 aa6.42□□□□□ -1.38
MSH6-211ENST00000606499 A0A096LNT2 108 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 A0A0A6YYD4 124 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 TRAV38-1A0A0B4J264 116 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 TMEM272A0A1B0GTI8 110 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 RFPL4AA6NLU0 287 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 CEACAM18A8MTB9 384 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 TMEM14DPA8MWL7 114 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 RNF223E7ERA6 249 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 RFPL4AL1F8VTS6 287 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 SIRPB1O00241 398 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 GEMIN2O14893 280 aaKnown RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 LDLRAD4O15165 306 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 ADAM20O43506 726 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 ZNF780AO75290 641 aaPredicted RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 FCN3O75636 299 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 HAND1O96004 215 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 GTF2F2P13984 249 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 RPS2P15880 293 aaKnown RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 SLC25A16P16260 332 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 ZNF182P17025 639 aaPredicted RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 AMY2BP19961 511 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 GABRR1P24046 479 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 IL2RGP31785 369 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 GABRA2P47869 451 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 RORCP51449 518 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 SEC61A1P61619 476 aaKnown RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 SCN1BQ07699 218 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 IKZF1Q13422 519 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 GPR176Q14439 515 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 ZNF146Q15072 292 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 SPIN3Q5JUX0 258 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 SHEQ5VZ18 495 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 FIP1L1Q6UN15 594 aaKnown RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 PRSS57Q6UWY2 283 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 DCDC5Q6ZRR9 648 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 OR2W3Q7Z3T1 314 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 BIVMQ86UB2 503 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 RTN4RL2Q86UN3 420 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 MUC20Q8N307 709 aaPredicted RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 FGFRL1Q8N441 504 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 MAPK1IP1LQ8NDC0 245 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 Q8NFD4 153 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 OR51T1Q8NGJ9 327 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 OR5H6Q8NGV6 325 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 CLDND2Q8NHS1 167 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 ANGPTL6Q8NI99 470 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 KCNG3Q8TAE7 436 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 SLC25A38Q96DW6 304 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 Q96M66 194 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 GAFA1Q96PS6 74 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 TMEM59Q9BXS4 323 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 LPAR5Q9H1C0 372 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 RHOFQ9HBH0 211 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 NDUFA13Q9P0J0 144 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 GHRLQ9UBU3 117 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 ST3GAL6Q9Y274 331 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 NOTCH2Q04721 2471 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 PRRC2AP48634 2157 aaKnown RBP6.41□□□□□ -1.38
MSH6-211ENST00000606499 HIVEP1P15822 2718 aa6.41□□□□□ -1.38
MSH6-211ENST00000606499 MXRA5Q9NR99 2828 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 NKX6-3A6NJ46 265 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 HSPB6O14558 160 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 TNFRSF13BO14836 293 aaPredicted RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 TMPRSS2O15393 492 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 OR7C1O76099 320 aaPredicted RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 FSTL3O95633 263 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 OR2H2O95918 312 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 IGHV2-5P01817 119 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 ZNF44P15621 663 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 PRDX2P32119 198 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 BMXP51813 675 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 CAPZA1P52907 286 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 LMO4P61968 165 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 RPS27AP62979 156 aaKnown RBP6.4□□□□□ -1.38
MSH6-211ENST00000606499 IL13RA1P78552 427 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 COL10A1Q03692 680 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 KCNJ8Q15842 424 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 TAF9Q16594 264 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 TMEM155Q4W5P6 130 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 NHLRC3Q5JS37 347 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 Q6P435 159 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 ZNF788Q6ZQV5 615 aa6.4□□□□□ -1.38
MSH6-211ENST00000606499 CROCCP3Q8IVE0 287 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms