RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 H7C417 338 aa12.34□□□□□ -0.43
VRK3-212ENST00000596814 OR7C1O76099 320 aaPredicted RBP12.34□□□□□ -0.43
VRK3-212ENST00000596814 CYB5R3P00387 301 aaPredicted RBP12.34□□□□□ -0.43
VRK3-212ENST00000596814 LHBP01229 141 aa12.34□□□□□ -0.43
VRK3-212ENST00000596814 HLA-DQB1P01920 261 aa12.34□□□□□ -0.43
VRK3-212ENST00000596814 RBMXP38159 391 aaKnown RBP12.34□□□□□ -0.43
VRK3-212ENST00000596814 IKZF1Q13422 519 aa12.34□□□□□ -0.43
VRK3-212ENST00000596814 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
VRK3-212ENST00000596814 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
VRK3-212ENST00000596814 PSMG3-AS1Q96PY0 264 aa12.34□□□□□ -0.43
VRK3-212ENST00000596814 IGHV1-69-2A0A0G2JMI3 117 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 IFNL4K9M1U5 179 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 KNG1P01042 644 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 HIST1H1DP16402 221 aaKnown RBP12.33□□□□□ -0.44
VRK3-212ENST00000596814 DUSP1P28562 367 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 TMEM50BP56557 158 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 ZNF146Q15072 292 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 PDCD1Q15116 288 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 PLAC9Q5JTB6 97 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 NKAPLQ5M9Q1 402 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 SIGIRRQ6IA17 410 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 Q6ZTK2 550 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 C1orf87Q8N0U7 546 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 ZNF295-AS1Q8N0V1 137 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 GDPD1Q8N9F7 314 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
VRK3-212ENST00000596814 ARHGAP5-AS1Q96IT6 56 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 NEDD4LQ96PU5 975 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 ZMAT3Q9HA38 289 aaKnown RBP12.33□□□□□ -0.44
VRK3-212ENST00000596814 TMEM106BQ9NUM4 274 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 ZNF581Q9P0T4 197 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 DNAJB11Q9UBS4 358 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 CACNG2Q9Y698 323 aa12.33□□□□□ -0.44
VRK3-212ENST00000596814 LRBAP50851 2863 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.32□□□□□ -0.44
VRK3-212ENST00000596814 MFNGO00587 321 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 CTDSPLO15194 276 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 PDCD6O75340 191 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 PTHLHP12272 177 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 GNB3P16520 340 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 CHATP28329 748 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 CD80P33681 288 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 CDKN1AP38936 164 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 ZNF260Q3ZCT1 412 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 RTN4RL2Q86UN3 420 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 FAM90A1Q86YD7 464 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 Q8N402 240 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 CCL17Q92583 94 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 GCDHQ92947 438 aaPredicted RBP12.32□□□□□ -0.44
VRK3-212ENST00000596814 BORCS5Q969J3 196 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 SDHCQ99643 169 aaPredicted RBP12.32□□□□□ -0.44
VRK3-212ENST00000596814 CCDC32Q9BV29 185 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 PECRQ9BY49 303 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 DCAF16Q9NXF7 216 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 GLS2Q9UI32 602 aa12.32□□□□□ -0.44
VRK3-212ENST00000596814 TMEM235A6NFC5 223 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 H3BUI4 141 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 HAND1O96004 215 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 GSTP1P09211 210 aaKnown RBP12.31□□□□□ -0.44
VRK3-212ENST00000596814 ZNF44P15621 663 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 MRPS10P82664 201 aaKnown RBP12.31□□□□□ -0.44
VRK3-212ENST00000596814 SCN1BQ07699 218 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 ARL6IP1Q15041 203 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 HFEQ30201 348 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 CDNFQ49AH0 187 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 RNASE12Q5GAN4 147 aaKnown RBP12.31□□□□□ -0.44
VRK3-212ENST00000596814 FAM201AQ5SY85 155 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 ATAD3CQ5T2N8 411 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 DCHS2Q6V1P9 2916 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 C6orf201Q7Z4U5 140 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 CCL19Q99731 98 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 PLEKHJ1Q9NW61 149 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 RCC2Q9P258 522 aaKnown RBP12.31□□□□□ -0.44
VRK3-212ENST00000596814 NLKQ9UBE8 527 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 IGHV3OR15-7A0A075B7D8 119 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 TMEM178BH3BS89 294 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 FUT3P21217 361 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 Q6P435 159 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 OR8H2Q8N162 312 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 SMIM4Q8WVI0 70 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 IFT22Q9H7X7 185 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.31□□□□□ -0.44
VRK3-212ENST00000596814 PLEKHA6Q9Y2H5 1048 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
VRK3-212ENST00000596814 AKAP6Q13023 2319 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 RFPL4AA6NLU0 287 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 OR2AT4A6NND4 320 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 SERPINE3A8MV23 424 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 RFPL4AL1F8VTS6 287 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 GABARAPH6UMI1 98 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 OVOL3O00110 214 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 SH2D1BO14796 132 aa12.3□□□□□ -0.44
VRK3-212ENST00000596814 DEGS1O15121 323 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms