RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SLC25A10Q9UBX3 287 aaPredicted RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 LPAR3Q9UBY5 353 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
LIG1-208ENST00000595758 SFTPBP07988 381 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 CHRM2P08172 466 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 NDUFB7P17568 137 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 SRMP19623 302 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 DUSP1P28562 367 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 BMXP51813 675 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 CAPZA1P52907 286 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 GP2P55259 537 aaKnown RBP11.9□□□□□ -0.5
LIG1-208ENST00000595758 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
LIG1-208ENST00000595758 FABP5Q01469 135 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 RSU1Q15404 277 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 CHRFAM7AQ494W8 412 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 SPIN3Q5JUX0 258 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 ASCL4Q6XD76 172 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 CDH26Q8IXH8 852 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 TSPAN14Q8NG11 270 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 DACT3Q96B18 629 aaPredicted RBP11.9□□□□□ -0.5
LIG1-208ENST00000595758 S100A13Q99584 98 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 TMPRSS13Q9BYE2 586 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 SLITRK2Q9H156 845 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.5
LIG1-208ENST00000595758 NDUFB11Q9NX14 153 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 GLS2Q9UI32 602 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 METRNQ9UJH8 293 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 ING4Q9UNL4 249 aa11.9□□□□□ -0.5
LIG1-208ENST00000595758 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
LIG1-208ENST00000595758 A0A087WXM4 84 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 CCRL2O00421 344 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 ARL6IP5O75915 188 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 CDRT1O95170 752 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 HAND1O96004 215 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 LIPFP07098 398 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 MTNR1BP49286 362 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 CAV3P56539 151 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 COL10A1Q03692 680 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 PAX8Q06710 450 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 ZNF146Q15072 292 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 NEDD8Q15843 81 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 ELP2Q6IA86 826 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 IL17RELQ6ZVW7 336 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 LRRTM1Q86UE6 522 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 TEX29Q8N6K0 151 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 NKAIN3Q8N8D7 197 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 H1FXQ92522 213 aaKnown RBP11.89□□□□□ -0.51
LIG1-208ENST00000595758 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 METTL9Q9H1A3 318 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 OPN4Q9UHM6 478 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 RPUSD1Q9UJJ7 312 aaKnown RBP11.89□□□□□ -0.51
LIG1-208ENST00000595758 GSTK1Q9Y2Q3 226 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 AUP1Q9Y679 476 aa11.89□□□□□ -0.51
LIG1-208ENST00000595758 NF1P21359 2839 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 SH2D1BO14796 132 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 HTR3BO95264 441 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 AVPP01185 164 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 ADRA2CP18825 462 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 SRP14P37108 136 aaKnown RBP11.88□□□□□ -0.51
LIG1-208ENST00000595758 FGF12P61328 243 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 SYT6Q5T7P8 510 aaPredicted RBP11.88□□□□□ -0.51
LIG1-208ENST00000595758 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
LIG1-208ENST00000595758 ASCC1Q8N9N2 400 aaKnown RBP11.88□□□□□ -0.51
LIG1-208ENST00000595758 Q8NFD4 153 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 OR10K1Q8NGX5 313 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 MUL1Q969V5 352 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 UQCC2Q9BRT2 126 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 DCTN5Q9BTE1 182 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 FAM234AQ9H0X4 552 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 ZNF696Q9H7X3 374 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 CNTD2Q9H8S5 307 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 PCDHB16Q9NRJ7 776 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 IL36GQ9NZH8 169 aa11.88□□□□□ -0.51
LIG1-208ENST00000595758 MRPS28Q9Y2Q9 187 aaKnown RBP11.88□□□□□ -0.51
LIG1-208ENST00000595758 TRDV1A0A1B0GX56 115 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 K7N7A8 449 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 ZNF780AO75290 641 aaPredicted RBP11.87□□□□□ -0.51
LIG1-208ENST00000595758 ZNF737O75373 536 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 TK1P04183 234 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 GABRR1P24046 479 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
LIG1-208ENST00000595758 SCN1BQ07699 218 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 SLC22A6Q4U2R8 563 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 CD200R1LQ6Q8B3 271 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 GLIPR1L1Q6UWM5 242 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 LYPD6Q86Y78 171 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 LY6G5BQ8NDX9 201 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 FOXRED1Q96CU9 486 aaPredicted RBP11.87□□□□□ -0.51
LIG1-208ENST00000595758 SNX22Q96L94 193 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 NR1H4Q96RI1 486 aaPredicted RBP11.87□□□□□ -0.51
LIG1-208ENST00000595758 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
LIG1-208ENST00000595758 EXOSC4Q9NPD3 245 aaKnown RBP11.87□□□□□ -0.51
LIG1-208ENST00000595758 NAV3Q8IVL0 2385 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 JMJD1CQ15652 2540 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 TRBV23-1A0A0A0MS06 115 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 TMEM82A0PJX8 343 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 SIRPB1O00241 398 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 DEGS1O15121 323 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms