RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PCDHB16Q9NRJ7 776 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 NLKQ9UBE8 527 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 COMMD3Q9UBI1 195 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 DNAJB11Q9UBS4 358 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 WIPI2Q9Y4P8 454 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 PPIAL4AQ9Y536 164 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 ETV7Q9Y603 341 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 MYO9AB2RTY4 2548 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 CR1P17927 2039 aa7.98□□□□□ -1.13
RFFL-210ENST00000582308 SETXQ7Z333 2677 aaKnown RBP7.97□□□□□ -1.13
RFFL-210ENST00000582308 ABCA2Q9BZC7 2435 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 A0A075B6Q4 140 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 TRAV38-1A0A0B4J264 116 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 OR2AT4A6NND4 320 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 CTDSP2O14595 271 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 GEMIN2O14893 280 aaKnown RBP7.97□□□□□ -1.13
RFFL-210ENST00000582308 HPGDSO60760 199 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 GYPAP02724 150 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 CSF3P09919 207 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 RAB6AP20340 208 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 PRDX2P32119 198 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 MDH2P40926 338 aaKnown RBP7.97□□□□□ -1.13
RFFL-210ENST00000582308 CEBPDP49716 269 aaPredicted RBP7.97□□□□□ -1.13
RFFL-210ENST00000582308 RPS27AP62979 156 aaKnown RBP7.97□□□□□ -1.13
RFFL-210ENST00000582308 TAF9Q16594 264 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 MICBQ29980 383 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 ZNF404Q494X3 552 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 STUMQ69YW2 141 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 SIGIRRQ6IA17 410 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 Q6P435 159 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 MZT2AQ6P582 158 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 PEG10Q86TG7 708 aaKnown RBP7.97□□□□□ -1.13
RFFL-210ENST00000582308 KRTAP1-3Q8IUG1 177 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 CMTM4Q8IZR5 234 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 FAM89BQ8N5H3 189 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 CD177Q8N6Q3 437 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 SAMD12Q8N8I0 201 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 MCFD2Q8NI22 146 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 ANGPTL6Q8NI99 470 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 C10orf105Q8TEF2 133 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 FAM168AQ92567 244 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 RAB1CQ92928 201 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 PTX4Q96A99 478 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 TIMD4Q96H15 378 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 GAL3ST1Q99999 423 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 TMEM246Q9BRR3 403 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 NICN1Q9BSH3 213 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 TM2D1Q9BX74 207 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 TMEM59Q9BXS4 323 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 MIXL1Q9H2W2 232 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 SEBOXQ9HB31 216 aaPredicted RBP7.97□□□□□ -1.13
RFFL-210ENST00000582308 OR14J1Q9UGF5 321 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 METRNQ9UJH8 293 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 ZNF222Q9UK12 451 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 ST3GAL6Q9Y274 331 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 AKAP9Q99996 3911 aa7.97□□□□□ -1.13
RFFL-210ENST00000582308 IGHV4-30-2A0A087WSY4 118 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 VWC2LB2RUY7 222 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 HAND1O96004 215 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 GPR6P46095 362 aaPredicted RBP7.96□□□□□ -1.14
RFFL-210ENST00000582308 GABRA2P47869 451 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 ART1P52961 327 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 SCN1BQ07699 218 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 IL13RA2Q14627 380 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 CLEC12BQ2HXU8 276 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 MOGAT2Q3SYC2 334 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 SPIN3Q5JUX0 258 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 ATPAF1Q5TC12 328 aaPredicted RBP7.96□□□□□ -1.14
RFFL-210ENST00000582308 CLEC2AQ6UVW9 174 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 LYPD2Q6UXB3 125 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 RTN4RL2Q86UN3 420 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 POM121Q96HA1 1249 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 CYYR1Q96J86 154 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 CCL13Q99616 98 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 URM1Q9BTM9 101 aaKnown RBP7.96□□□□□ -1.14
RFFL-210ENST00000582308 BPESC1Q9GZL8 116 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 ABCG5Q9H222 651 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 MMP27Q9H306 513 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 RHBDL2Q9NX52 303 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 A3GALT2U3KPV4 340 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 ITPR3Q14573 2671 aa7.96□□□□□ -1.14
RFFL-210ENST00000582308 TRAV24A0A0B4J272 114 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 A0A1B0GW55 424 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 TMEM82A0PJX8 343 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 ISPDA4D126 451 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 CEACAM18A8MTB9 384 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 FOXI3A8MTJ6 420 aaPredicted RBP7.95□□□□□ -1.14
RFFL-210ENST00000582308 RAB27BO00194 218 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 NDUFS8O00217 210 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 SIRPB1O00241 398 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 SH2D1BO14796 132 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DEGS1O15121 323 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 SOCS1O15524 211 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 FCN3O75636 299 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 OR7C1O76099 320 aaPredicted RBP7.95□□□□□ -1.14
RFFL-210ENST00000582308 OR2H2O95918 312 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 APOA1P02647 267 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 EIF4EP06730 217 aaKnown RBP7.95□□□□□ -1.14
RFFL-210ENST00000582308 DUX4L2P0CJ85 424 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DUX4L3P0CJ86 424 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms