RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 RAB19A4D1S5 217 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 A8MWL6 223 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 H3BP45 60 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 SMLR1H3BR10 107 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 H7C2Y5 167 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 M0QXV9 152 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 PSMD11O00231 422 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 CDIPTO14735 213 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 MYL12BO14950 172 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 CST4P01036 141 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 IGHV1-46P01743 117 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 IGHG2P01859 326 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 MAS1P04201 325 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 IVLP07476 585 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 PFN1P07737 140 aaKnown RBP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 RD3LP0DJH9 198 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 GABRA1P14867 456 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 BGNP21810 368 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 PRSS3P35030 304 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 IDH2P48735 452 aaKnown RBP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 OR12D2P58182 307 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 TAS2R60P59551 318 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 TNNC1P63316 161 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 C2orf54Q08AI8 447 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 STX4Q12846 297 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 ZNF235Q14590 738 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 WDR43Q15061 677 aaKnown RBP eCLIP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 ZBTB6Q15916 424 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 Q3ZCU0 254 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 Q499Y3 187 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 CDNFQ49AH0 187 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 HES3Q5TGS1 186 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 GLYATQ6IB77 296 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 CLEC20AQ6ZU45 233 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 FAM19A3Q7Z5A8 133 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 TMEM144Q7Z5S9 345 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 LINC00596Q86U02 117 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 NT5DC3Q86UY8 548 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 RBM45Q8IUH3 476 aaKnown RBP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 ZFP82Q8N141 532 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 OR9A2Q8NGT5 310 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 OR8K3Q8NH51 312 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 ZFAND1Q8TCF1 268 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 C22orf15Q8WYQ4 148 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 QKIQ96PU8 341 aaKnown RBP eCLIP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 PDCD1LG2Q9BQ51 273 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 SEC22CQ9BRL7 303 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 TM2D3Q9BRN9 247 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 BBS2Q9BXC9 721 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 FBXL15Q9H469 300 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 PRORYQ9H606 182 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 HAUS4Q9H6D7 363 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 WDR55Q9H6Y2 383 aaPredicted RBP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 TMBIM4Q9HC24 238 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 LZTFL1Q9NQ48 299 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 PARP11Q9NR21 331 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 STX18Q9P2W9 335 aaKnown RBP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 CFL2Q9Y281 166 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 AP3M1Q9Y2T2 418 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 ZSWIM8A7E2V4 1837 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 CACNA1DQ01668 2161 aa0.86□□□□□ -2.27
TOP2A-202ENST00000577541 AQRO60306 1485 aaKnown RBP eCLIP0.86□□□□□ -2.27
TOP2A-202ENST00000577541 IGKV1D-37A0A075B6S9 117 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 A0A1B0GTI1 187 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 LINC00854A0A1B0GVQ3 168 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 MYBPHLA2RUH7 354 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 ERICH4A6NGS2 130 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 CENPBD1B2RD01 187 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 C4orf51C9J302 202 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 H3BQ85 93 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 POLR3GO15318 223 aaPredicted RBP0.85□□□□□ -2.27
TOP2A-202ENST00000577541 SGCEO43556 437 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 ENTPD6O75354 484 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 SCO1O75880 301 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 MYO1DO94832 1006 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 OR2A4O95047 310 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 KLHL2O95198 593 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 NRASP01111 189 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 HRASP01112 189 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 KRASP01116 189 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 S100A9P06702 114 aaKnown RBP0.85□□□□□ -2.27
TOP2A-202ENST00000577541 OR4Q2P0C623 313 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 CCDC172P0C7W6 258 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 HLA-GP17693 338 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 CCNOP22674 350 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 IMPA1P29218 277 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 IL12BP29460 328 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 NOS1P29475 1434 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 TSPOP30536 169 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 DEKP35659 375 aaKnown RBP0.85□□□□□ -2.27
TOP2A-202ENST00000577541 NUP62P37198 522 aaPredicted RBP0.85□□□□□ -2.27
TOP2A-202ENST00000577541 LGALS7P47929 136 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 RPS11P62280 158 aaKnown RBP eCLIP0.85□□□□□ -2.27
TOP2A-202ENST00000577541 LAMTOR4Q0VGL1 99 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 XRCC4Q13426 336 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 TOMM34Q15785 309 aaPredicted RBP0.85□□□□□ -2.27
TOP2A-202ENST00000577541 PDZD11Q5EBL8 140 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 SYT6Q5T7P8 510 aaPredicted RBP0.85□□□□□ -2.27
TOP2A-202ENST00000577541 FAM104BQ5XKR9 115 aa0.85□□□□□ -2.27
TOP2A-202ENST00000577541 ELP2Q6IA86 826 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms