RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NIPSNAP1Q9BPW8 284 aa10.59□□□□□ -0.71
COPS3-214ENST00000577246 MYLK2Q9H1R3 596 aa10.59□□□□□ -0.71
COPS3-214ENST00000577246 IKZF2Q9UKS7 526 aa10.59□□□□□ -0.71
COPS3-214ENST00000577246 HHLA2Q9UM44 414 aa10.59□□□□□ -0.71
COPS3-214ENST00000577246 V9GYS6 101 aa10.59□□□□□ -0.71
COPS3-214ENST00000577246 FAM230AA0A1W2PPH8 454 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 TMEM82A0PJX8 343 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 SH2D7A6NKC9 451 aaPredicted RBP10.58□□□□□ -0.72
COPS3-214ENST00000577246 CYB5AP00167 134 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 IGLV1-47P01700 117 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 CHATP28329 748 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 MNAT1P51948 309 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 PRRX1P54821 245 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 P2RX3P56373 397 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 RAB25P57735 213 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 GINS1Q14691 196 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 NKAPLQ5M9Q1 402 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 TPTE2P1Q5T6R2 138 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 C16orf89Q6UX73 402 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 CYP2R1Q6VVX0 501 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 EGFL6Q8IUX8 553 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 TPRX1Q8N7U7 411 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 OR5M8Q8NGP6 311 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 TRMT10AQ8TBZ6 339 aaKnown RBP10.58□□□□□ -0.72
COPS3-214ENST00000577246 GIPC3Q8TF64 312 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 FEVQ99581 238 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 CHST6Q9GZX3 395 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 ZNF556Q9HAH1 456 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 TAS2R3Q9NYW6 316 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 MTCH1Q9NZJ7 389 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 ACTR3BQ9P1U1 418 aa10.58□□□□□ -0.72
COPS3-214ENST00000577246 SERPINE3A8MV23 424 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 BUB1B-PAK6H3BSN5 160 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 CCL24O00175 119 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 GATBO75879 557 aaKnown RBP10.57□□□□□ -0.72
COPS3-214ENST00000577246 CDK2P24941 298 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 CD34P28906 385 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 FUT6P51993 359 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 CDC42P60953 191 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 MFGE8Q08431 387 aaPredicted RBP10.57□□□□□ -0.72
COPS3-214ENST00000577246 APOFQ13790 326 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 KPNB1Q14974 876 aaKnown RBP10.57□□□□□ -0.72
COPS3-214ENST00000577246 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 FAM98BQ52LJ0 330 aaKnown RBP10.57□□□□□ -0.72
COPS3-214ENST00000577246 SPIN3Q5JUX0 258 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 PRAMEF5Q5TYX0 476 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 THNSL2Q86YJ6 484 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 FOXRED2Q8IWF2 684 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 ELMOD2Q8IZ81 293 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 OR14K1Q8NGZ2 314 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 OR8U1Q8NH10 309 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 SLAMF9Q96A28 289 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 CADM1Q9BY67 442 aaKnown RBP10.57□□□□□ -0.72
COPS3-214ENST00000577246 PALMDQ9NP74 551 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 OR52A1Q9UKL2 312 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 AMMECR1Q9Y4X0 333 aaPredicted RBP10.57□□□□□ -0.72
COPS3-214ENST00000577246 R4GMQ9 66 aa10.57□□□□□ -0.72
COPS3-214ENST00000577246 FGF16O43320 207 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 MMP23AO75900 390 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 SERPINA3P01011 423 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 IGHA1P01876 353 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 SLC2A5P22732 501 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 ECI1P42126 302 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 HCCSP53701 268 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 ZNF91Q05481 1191 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 Q6ZSR3 168 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 SLC25A26Q70HW3 274 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 BBS1Q8NFJ9 593 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 OR52N4Q8NGI2 321 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 OR4D6Q8NGJ1 314 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 RPEQ96AT9 228 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 BORCS8Q96FH0 119 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 PRR25Q96S07 402 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 MNTQ99583 582 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 ASCL2Q99929 193 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 GON7Q9BXV9 100 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
COPS3-214ENST00000577246 SIRT4Q9Y6E7 314 aaPredicted RBP10.56□□□□□ -0.72
COPS3-214ENST00000577246 TRBV2A0A0J9YWF9 115 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 F8VVB4 439 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 F8VWA3 439 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 PSPNO60542 156 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 MRPL3P09001 348 aaKnown RBP10.55□□□□□ -0.72
COPS3-214ENST00000577246 LYL1P12980 280 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 OSMP13725 252 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 PTGFRP43088 359 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 LUMP51884 338 aaPredicted RBP10.55□□□□□ -0.72
COPS3-214ENST00000577246 RBM39Q14498 530 aaKnown RBP10.55□□□□□ -0.72
COPS3-214ENST00000577246 ZNF146Q15072 292 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 TEX38Q6PEX7 206 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 ZNF322Q6U7Q0 402 aaPredicted RBP10.55□□□□□ -0.72
COPS3-214ENST00000577246 SLC35E3Q7Z769 313 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 DEFB107AQ8IZN7 70 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 CCDC54Q8NEL0 328 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 CORO2AQ92828 525 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 TOMM40LQ969M1 308 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 RAX2Q96IS3 184 aa10.55□□□□□ -0.72
COPS3-214ENST00000577246 NOL4LQ96MY1 436 aaPredicted RBP10.55□□□□□ -0.72
COPS3-214ENST00000577246 CNN2Q99439 309 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms