RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ANXA3P12429 323 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 GNB3P16520 340 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 MAPK3P27361 379 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 EIF1P41567 113 aaKnown RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SLC7A2P52569 658 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 DNAJB13P59910 316 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SPCS3P61009 180 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 RAB5BP61020 215 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 GNB1P62873 340 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 BIKQ13323 160 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SSX2Q16385 188 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 GABRA6Q16445 453 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF239Q16600 458 aaKnown RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 MICBQ29980 383 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 TMEM44Q2T9K0 475 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 HIKESHIQ53FT3 197 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 PABPC1L2AQ5JQF8 200 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 CDKL4Q5MAI5 379 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SPANXN3Q5MJ09 141 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 STEAP4Q687X5 459 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 OLFML2AQ68BL7 652 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 HIST2H2AA3Q6FI13 130 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 UQCC3Q6UW78 93 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 C10orf107Q8IVU9 208 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 C12orf45Q8N5I9 185 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 ZNRF4Q8WWF5 429 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 GTF3AQ92664 365 aaKnown RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 CMTM7Q96FZ5 175 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 C7orf34Q96L11 122 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 OR5M11Q96RB7 305 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 NKX3-1Q99801 234 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SEC22CQ9BRL7 303 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 ALX4Q9H161 411 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 MED28Q9H204 178 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 NMRAL1Q9HBL8 299 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 MMP26Q9NRE1 261 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 GLRX2Q9NS18 164 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 CA10Q9NS85 328 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 MAN2C1Q9NTJ4 1040 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 RBFOX1Q9NWB1 397 aaKnown RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 IMPAD1Q9NX62 359 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SCP2D1Q9UJQ7 156 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 STAB2Q8WWQ8 2551 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 A0A087WW49 117 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 A0A087X0K7 114 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 A0A0A6YYD5 115 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 IGHV1-18A0A0C4DH31 117 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 A0A0X1KG70 313 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 IQCMA0A1B0GVH7 501 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 FAM240BA0A1B0GVZ2 78 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 RAB19A4D1S5 217 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 PRORSD1PA6NEY8 169 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 A8MXK9 166 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 E5RGE8 158 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 AIPO00170 330 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 SC5DO75845 299 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 IGKV1D-16P01601 117 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 HLA-DQB1P01920 261 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 FBP1P09467 338 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 SLC2A1P11166 492 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 PGAM1P18669 254 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 PAX6P26367 422 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 STOMP27105 288 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 CALCRP30988 508 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 SDC2P34741 201 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 ALDH3B1P43353 468 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MAGEA2P43356 314 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MAGEA12P43365 314 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MAGEB1P43366 347 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 TGM4P49221 684 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 SLC35A2P78381 396 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MAD2L1BPQ15013 274 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 ZNHIT3Q15649 155 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 TOMM34Q15785 309 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 GUCA2BQ16661 112 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF876PQ49A33 203 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 AGKQ53H12 422 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 DMRTC1Q5HYR2 192 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 KLF17Q5JT82 389 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 CPTPQ5TA50 214 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 DDI2Q5TDH0 399 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 TRIQKQ629K1 86 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 ACSM5Q6NUN0 579 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MED27Q6P2C8 311 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 SSX9Q7RTT3 188 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 COX8CQ7Z4L0 72 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MYPOPQ86VE0 399 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 LRP11Q86VZ4 500 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 OFCC1Q8IZS5 231 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 CLDN22Q8N7P3 220 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 C17orf47Q8NEP4 570 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 OR52H1Q8NGJ2 320 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 TCTEX1D2Q8WW35 142 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 TRNT1Q96Q11 434 aaKnown RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 OR2M2Q96R28 347 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 C7orf50Q9BRJ6 194 aaKnown RBP4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MARVELD1Q9BSK0 173 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 ACPTQ9BZG2 426 aa4.34□□□□□ -1.71
SF3B3-214ENST00000572365 MEAF6Q9HAF1 191 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms