RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 FAM90A20PA6NIJ5 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A8PA6NJQ4 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A7PA6NKC0 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A22PA8MWA6 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A12PA8MX19 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A5PA8MXJ8 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A23PA8MXZ1 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 CLDN25C9JDP6 229 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 LYNX1G3V0Z9 82 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 TMEM178BH3BS89 294 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 RAB27BO00194 218 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 OR7C1O76099 320 aaPredicted RBP12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 LY6HO94772 140 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF205O95201 554 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 KNG1P01042 644 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 LHBP01229 141 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A15PP0C7V4 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A13PP0C7W8 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A14PP0C7W9 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A24PP0C7X0 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 LYNX1P0DP58 116 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 DAOP14920 347 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 BLVRBP30043 206 aaPredicted RBP12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF846Q147U1 533 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 PDCD1Q15116 288 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 MPV17LQ2QL34 196 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 SPIN3Q5JUX0 258 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A1Q86YD7 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM89BQ8N5H3 189 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 C19orf18Q8NEA5 215 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 YIPF5Q969M3 257 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 WDR12Q9GZL7 423 aaKnown RBP12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 DLL4Q9NR61 685 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF581Q9P0T4 197 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 NLKQ9UBE8 527 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 GLS2Q9UI32 602 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 A0A0G2JMP0 313 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 A0A0X1KG70 313 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 HAND1O96004 215 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF44P15621 663 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 NR4A2P43354 598 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 EFNA4P52798 201 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 MRPS11P82912 194 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF45Q02386 682 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 SCN1BQ07699 218 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 SFRP4Q6FHJ7 346 aaPredicted RBP12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 SNX29P2Q8IUI4 249 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 OR4M2Q8NGB6 313 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 NRGNQ92686 78 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 RAB3CQ96E17 227 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 POM121Q96HA1 1249 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 NUDT16L1Q9BRJ7 211 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 LIME1Q9H400 295 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 WIPI2Q9Y4P8 454 aa12.95□□□□□ -0.34
HERPUD1-219ENST00000570273 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 OOEPA6NGQ2 149 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 FOXI3A8MTJ6 420 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 LGALS8O00214 317 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 SIRPB1O00241 398 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 SH2D1BO14796 132 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 NDUFS7O75251 213 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 PDCD6O75340 191 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 RP2O75695 350 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 INHBBP09529 407 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 HIST1H1DP16402 221 aaKnown RBP12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 COL8A2P25067 703 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 MNDAP41218 407 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 CEBPDP49716 269 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF146Q15072 292 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 ATAD3CQ5T2N8 411 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 PYHIN1Q6K0P9 492 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 RTN4RL2Q86UN3 420 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 DEFB108BQ8NET1 73 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 ARHGAP5-AS1Q96IT6 56 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 SOSTQ9BQB4 213 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 RABL2AQ9UBK7 228 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 RABL2BQ9UNT1 228 aa12.94□□□□□ -0.34
HERPUD1-219ENST00000570273 PPIAL4EA0A075B759 164 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 RFPL4AA6NLU0 287 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 OR2AT4A6NND4 320 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PPIAL4DF5H284 164 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 RFPL4AL1F8VTS6 287 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 H3BUI4 141 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 DEGS1O15121 323 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 DSCAMO60469 2012 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 OR2H2O95918 312 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 F12P00748 615 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PPIAL4FP0DN26 164 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 GNB3P16520 340 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PTBP1P26599 531 aaKnown RBP eCLIP12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 CHATP28329 748 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PTH2RP49190 550 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 TMEM50BP56557 158 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 PITPNAQ00169 270 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 ZNF79Q15937 498 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 CARTPTQ16568 116 aa12.93□□□□□ -0.34
HERPUD1-219ENST00000570273 MICBQ29980 383 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms