RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 C11orf42Q8N5U0 333 aa15.03■□□□□ -0
CLN6-204ENST00000564752 OR4M1Q8NGD0 313 aa15.03■□□□□ -0
CLN6-204ENST00000564752 OR51A4Q8NGJ6 313 aa15.03■□□□□ -0
CLN6-204ENST00000564752 OR52I1Q8NGK6 324 aa15.03■□□□□ -0
CLN6-204ENST00000564752 SPSB1Q96BD6 273 aa15.03■□□□□ -0
CLN6-204ENST00000564752 OPALINQ96PE5 141 aa15.03■□□□□ -0
CLN6-204ENST00000564752 ISG20L2Q9H9L3 353 aaKnown RBP15.03■□□□□ -0
CLN6-204ENST00000564752 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.03■□□□□ -0
CLN6-204ENST00000564752 F8VVB4 439 aa15.02■□□□□ -0
CLN6-204ENST00000564752 F8VWA3 439 aa15.02■□□□□ -0
CLN6-204ENST00000564752 CHRM2P08172 466 aa15.02■□□□□ -0
CLN6-204ENST00000564752 PIPP12273 146 aaPredicted RBP15.02■□□□□ -0
CLN6-204ENST00000564752 KIR2DS4P43632 304 aa15.02■□□□□ -0
CLN6-204ENST00000564752 LRRC36Q1X8D7 754 aa15.02■□□□□ -0
CLN6-204ENST00000564752 KLHL22Q53GT1 634 aa15.02■□□□□ -0
CLN6-204ENST00000564752 CRIP3Q6Q6R5 217 aa15.02■□□□□ -0
CLN6-204ENST00000564752 EGFL6Q8IUX8 553 aa15.02■□□□□ -0
CLN6-204ENST00000564752 OR13C9Q8NGT0 318 aa15.02■□□□□ -0
CLN6-204ENST00000564752 COMMD4Q9H0A8 199 aa15.02■□□□□ -0
CLN6-204ENST00000564752 HEXA-AS1Q9H8Q6 139 aa15.02■□□□□ -0
CLN6-204ENST00000564752 MRPS18AQ9NVS2 196 aaKnown RBP15.02■□□□□ -0
CLN6-204ENST00000564752 SIGLEC9Q9Y336 463 aa15.02■□□□□ -0
CLN6-204ENST00000564752 hCG_1809904A0A1W2PP81 198 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 A0A1W2PPE2 198 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 A0A1W2PR64 198 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 A0A1W2PRV1 198 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 TMEM212A6NML5 194 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 K7N7A8 449 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 CSF1P09603 554 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 CCDC159P0C7I6 412 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 EFNB2P52799 333 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 GBX2P52951 348 aaPredicted RBP15.01□□□□□ -0.01
CLN6-204ENST00000564752 HERPUD1Q15011 391 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 LY6EQ16553 131 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 SMN1Q16637 294 aaKnown RBP15.01□□□□□ -0.01
CLN6-204ENST00000564752 LRRC75BQ2VPJ9 315 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 LPCAT4Q643R3 524 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 HAVCR2Q8TDQ0 301 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 ZNF649Q9BS31 505 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 NEK6Q9HC98 313 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 C8orf4Q9NR00 106 aa15.01□□□□□ -0.01
CLN6-204ENST00000564752 RBFOX1Q9NWB1 397 aaKnown RBP15.01□□□□□ -0.01
CLN6-204ENST00000564752 TRBV2A0A0J9YWF9 115 aa15□□□□□ -0.01
CLN6-204ENST00000564752 ZNF737O75373 536 aa15□□□□□ -0.01
CLN6-204ENST00000564752 WBP4O75554 376 aaKnown RBP15□□□□□ -0.01
CLN6-204ENST00000564752 HAND1O96004 215 aa15□□□□□ -0.01
CLN6-204ENST00000564752 RPSAP08865 295 aaKnown RBP15□□□□□ -0.01
CLN6-204ENST00000564752 CCL3L1P16619 93 aa15□□□□□ -0.01
CLN6-204ENST00000564752 BCL3P20749 454 aa15□□□□□ -0.01
CLN6-204ENST00000564752 EDDM3BP56851 147 aa15□□□□□ -0.01
CLN6-204ENST00000564752 ZNF273Q14593 569 aa15□□□□□ -0.01
CLN6-204ENST00000564752 RCN1Q15293 331 aa15□□□□□ -0.01
CLN6-204ENST00000564752 ZNF691Q5VV52 312 aa15□□□□□ -0.01
CLN6-204ENST00000564752 C11orf88Q6PI97 169 aa15□□□□□ -0.01
CLN6-204ENST00000564752 GDPD3Q7L5L3 318 aa15□□□□□ -0.01
CLN6-204ENST00000564752 OR8H2Q8N162 312 aa15□□□□□ -0.01
CLN6-204ENST00000564752 OR5AK2Q8NH90 309 aa15□□□□□ -0.01
CLN6-204ENST00000564752 TSEN15Q8WW01 171 aaKnown RBP15□□□□□ -0.01
CLN6-204ENST00000564752 CYGBQ8WWM9 190 aa15□□□□□ -0.01
CLN6-204ENST00000564752 RFT1Q96AA3 541 aa15□□□□□ -0.01
CLN6-204ENST00000564752 RAB18Q9NP72 206 aa15□□□□□ -0.01
CLN6-204ENST00000564752 IL36RNQ9UBH0 155 aa15□□□□□ -0.01
CLN6-204ENST00000564752 DSCAML1Q8TD84 2053 aa15□□□□□ -0.01
CLN6-204ENST00000564752 E9PI62 339 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 ZFPL1O95159 310 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 CLIC3O95833 236 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 PRKACAP17612 351 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 PAX6P26367 422 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 PEX2P28328 305 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 NPBWR2P48146 333 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 ERVFRD-1P60508 538 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 Q6ZTK2 550 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 C1QL4Q86Z23 238 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 FAM58AQ8N1B3 248 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 PACRGLQ8N7B6 248 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 OR4C13Q8NGP0 309 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 CNIH3Q8TBE1 160 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 PIFOQ8TCI5 191 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 SNX22Q96L94 193 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 SPACA5Q96QH8 159 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 PDCD1LG2Q9BQ51 273 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 JAM3Q9BX67 310 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 ZCCHC4Q9H5U6 513 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 FGF20Q9NP95 211 aaPredicted RBP14.99□□□□□ -0.01
CLN6-204ENST00000564752 DHDHQ9UQ10 334 aa14.99□□□□□ -0.01
CLN6-204ENST00000564752 IRGMA1A4Y4 181 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 MEGF11A6BM72 1044 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 MT-ND2P03891 347 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 HCKP08631 526 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 LIMS3P0CW19 117 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 LIMS4P0CW20 117 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 GABRR1P24046 479 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 COX7A1P24310 79 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 SNU13P55769 128 aaKnown RBP14.98□□□□□ -0.01
CLN6-204ENST00000564752 PDZK1IP1Q13113 114 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 EDDM3AQ14507 147 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 SPIN3Q5JUX0 258 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 TTC23Q5W5X9 447 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 SETD9Q8NE22 299 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 OR5D18Q8NGL1 313 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms