RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 UBBP0CG47 229 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 C22orf42Q6IC83 251 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 GLIPR1L1Q6UWM5 242 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 ZNRF1Q8ND25 227 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 OR51T1Q8NGJ9 327 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 OR5D13Q8NGL4 314 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 TBC1D15Q8TC07 691 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 RAB40AQ8WXH6 277 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 MRPS24Q96EL2 167 aaKnown RBP13.6□□□□□ -0.23
USB1-206ENST00000562534 DMRTB1Q96MA1 342 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 FAM234AQ9H0X4 552 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 OR51E2Q9H255 320 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 SLC25A10Q9UBX3 287 aaPredicted RBP13.6□□□□□ -0.23
USB1-206ENST00000562534 AK6Q9Y3D8 172 aaKnown RBP13.6□□□□□ -0.23
USB1-206ENST00000562534 V9GY05 133 aa13.6□□□□□ -0.23
USB1-206ENST00000562534 KIAA1324LA8MWY0 1029 aaPredicted RBP13.59□□□□□ -0.23
USB1-206ENST00000562534 CALCBP10092 127 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 GTF2F2P13984 249 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 ZNF16P17020 682 aaPredicted RBP13.59□□□□□ -0.23
USB1-206ENST00000562534 LMO1P25800 156 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 HTR2CP28335 458 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 CAPZA1P52907 286 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 CAV3P56539 151 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 IKZF1Q13422 519 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 DGUOKQ16854 277 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 AWAT2Q6E213 333 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 TPRA1Q86W33 373 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 OSR2Q8N2R0 312 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 FAM216BQ8N7L0 139 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 OR4D6Q8NGJ1 314 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 PPP1R35Q8TAP8 253 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 KCTD7Q96MP8 289 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 NKX3-1Q99801 234 aaPredicted RBP13.59□□□□□ -0.23
USB1-206ENST00000562534 CHCHD6Q9BRQ6 235 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 TMEM160Q9NX00 188 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 ABCA1O95477 2261 aa13.59□□□□□ -0.23
USB1-206ENST00000562534 F8P00451 2351 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 A0A0G2JMP0 313 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 A0A0X1KG70 313 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 KIR2DS1A0A191URI9 304 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 J3QLI3 93 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 K7N7A8 449 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 DEGS1O15121 323 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 HAND1O96004 215 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 GADD45AP24522 165 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 DUSP1P28562 367 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 COL10A1Q03692 680 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 SLC22A6Q4U2R8 563 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 NHLRC3Q5JS37 347 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 DCAF12L2Q5VW00 463 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 FAHD2BQ6P2I3 314 aaPredicted RBP13.58□□□□□ -0.24
USB1-206ENST00000562534 BTNL3Q6UXE8 466 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 BTN2A1Q7KYR7 527 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 CHST4Q8NCG5 386 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 OR4M2Q8NGB6 313 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 OR6M1Q8NGM8 313 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 OR10K1Q8NGX5 313 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 ST8SIA4Q92187 359 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 FAHD2AQ96GK7 314 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 SNX22Q96L94 193 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 PLGRKTQ9HBL7 147 aa13.58□□□□□ -0.24
USB1-206ENST00000562534 LOC100506127A0A0U1RQW1 187 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 A0A1B0GW55 424 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 SLC17A2O00624 439 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 SLC22A1O15245 554 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 TFF1P04155 84 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 TK1P04183 234 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4L2P0CJ85 424 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4L3P0CJ86 424 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4L4P0CJ87 422 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4L5P0CJ88 424 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4L6P0CJ89 424 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4L7P0CJ90 424 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 NDUFB7P17568 137 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 RAB3BP20337 219 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 SERPINA2P20848 420 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 CEBPDP49716 269 aaPredicted RBP13.57□□□□□ -0.24
USB1-206ENST00000562534 SCN1BQ07699 218 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 IL13RA2Q14627 380 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4L9Q6RFH8 374 aaPredicted RBP13.57□□□□□ -0.24
USB1-206ENST00000562534 LINC00596Q86U02 117 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 TMEM185AQ8NFB2 350 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 OR13F1Q8NGS4 319 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 POM121Q96HA1 1249 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 CST11Q9H112 138 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 MMP26Q9NRE1 261 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 DUX4Q9UBX2 424 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 ST3GAL6Q9Y274 331 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 INSIG2Q9Y5U4 225 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 CELSR1Q9NYQ6 3014 aa13.57□□□□□ -0.24
USB1-206ENST00000562534 ZNF469Q96JG9 3925 aaPredicted RBP13.57□□□□□ -0.24
USB1-206ENST00000562534 CSPG4Q6UVK1 2322 aa13.56□□□□□ -0.24
USB1-206ENST00000562534 A0A0G2JK05 382 aa13.56□□□□□ -0.24
USB1-206ENST00000562534 H3BUI4 141 aa13.56□□□□□ -0.24
USB1-206ENST00000562534 ENSAO43768 121 aaKnown RBP13.56□□□□□ -0.24
USB1-206ENST00000562534 AIREO43918 545 aa13.56□□□□□ -0.24
USB1-206ENST00000562534 OR2H2O95918 312 aa13.56□□□□□ -0.24
USB1-206ENST00000562534 TFAP2AP05549 437 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms