RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ZNF442Q9H7R0 627 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 UBQLN4Q9NRR5 601 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 THUMPD1Q9NXG2 353 aaKnown RBP2.63□□□□□ -1.99
HERC1-215ENST00000561436 VPS29Q9UBQ0 182 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 IKZF2Q9UKS7 526 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 TFR2Q9UP52 801 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 ZNF256Q9Y2P7 627 aaPredicted RBP2.63□□□□□ -1.99
HERC1-215ENST00000561436 SLC25A15Q9Y619 301 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 HIVEP3Q5T1R4 2406 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 MYH10P35580 1976 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 CCDC168Q8NDH2 2452 aa2.63□□□□□ -1.99
HERC1-215ENST00000561436 PPIAL4EA0A075B759 164 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 A0A0J9YXY3 114 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 NCF1BA6NI72 391 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 A6NIZ1 184 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 OR5B21A6NL26 309 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 NCF1CA8MVU1 366 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 E7EQL1 145 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 CLDN34H7C241 214 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 DYNC1I1O14576 645 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 NBR2O15453 112 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 EIF4E2O60573 245 aaKnown RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 EIF1BO60739 113 aaKnown RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 ZNF780AO75290 641 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 WBP4O75554 376 aaKnown RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 UTS2O95399 124 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 STAMBPO95630 424 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 KRT6AP02538 564 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 KRT16P08779 473 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 PPIAL4FP0DN26 164 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 HPGDP15428 266 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 NCK1P16333 377 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 IDH3GP51553 393 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 SEC61GP60059 68 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 PRPS1P60891 318 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 ACTR3P61158 418 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 RAP1BP61224 184 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 ACTG1P63261 375 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 CAV1Q03135 178 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 OR5I1Q13606 314 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 GNMTQ14749 295 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 OR4D1Q15615 310 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 TRIP13Q15645 432 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 DUSP7Q16829 419 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 PLPPR5Q32ZL2 321 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 OTPQ5XKR4 325 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 SAXO2Q658L1 398 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 TTC19Q6DKK2 380 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 H2BFWTQ7Z2G1 175 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 COMMD6Q7Z4G1 85 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 C11orf53Q8IXP5 236 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 RDH10Q8IZV5 341 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 CEND1Q8N111 149 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 RNF175Q8N4F7 328 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 ZNF433Q8N7K0 673 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 OR1L4Q8NGR5 311 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 PIGXQ8TBF5 258 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 C7orf33Q8WU49 177 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 DCAKDQ8WVC6 231 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 TMEM234Q8WY98 164 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 CHCHD10Q8WYQ3 142 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 DCUN1D4Q92564 292 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 APH1AQ96BI3 265 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 ZHX1-C8orf76Q96EF9 292 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 ARL5BQ96KC2 179 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 ZIM3Q96PE6 472 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 TECTBQ96PL2 329 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 RBBP8Q99708 897 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 OR51J1Q9H342 316 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 RANBP3Q9H6Z4 567 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 NANOGQ9H9S0 305 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 MED29Q9NX70 200 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 MED11Q9P086 117 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 GUCA1BQ9UMX6 200 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 TRAPPC4Q9Y296 219 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 HDGFL3Q9Y3E1 203 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 TDRD6O60522 2096 aaKnown RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 NCOA6Q14686 2063 aaPredicted RBP2.62□□□□□ -1.99
HERC1-215ENST00000561436 CENPEQ02224 2701 aa2.62□□□□□ -1.99
HERC1-215ENST00000561436 PRRC2AP48634 2157 aaKnown RBP2.61□□□□□ -1.99
HERC1-215ENST00000561436 HIVEP2P31629 2446 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 ARPC4-TTLL3A0A0A6YYG9 625 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 A0A0G2JRQ6 117 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 A0A0J9YW62 118 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 CIB4A0PJX0 185 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 BTBD17A6NE02 478 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 FAM159BA6NKW6 160 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 A8MU10 97 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 SUPT3HB4E1H0 165 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 UPK1AO00322 258 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 AGPAT2O15120 278 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 MGRN1O60291 552 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 ENTPD5O75356 428 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 SUPT3HO75486 399 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 CIB2O75838 187 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 KLHL2O95198 593 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 SERPINA3P01011 423 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 MSMBP08118 114 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 PRPS2P11908 318 aa2.61□□□□□ -1.99
HERC1-215ENST00000561436 GFAPP14136 432 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms