RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PIPP12273 146 aaPredicted RBP13.05□□□□□ -0.32
LMX1B-204ENST00000561065 SAA4P35542 130 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 BMXP51813 675 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 TAS2R43P59537 309 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 KRTAP10-3P60369 221 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 STX19Q8N4C7 294 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 OR52N1Q8NH53 320 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 C17orf50Q8WW18 174 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 DYRK2Q92630 601 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 ADAT3Q96EY9 351 aaPredicted RBP13.05□□□□□ -0.32
LMX1B-204ENST00000561065 HES4Q9HCC6 221 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 SCN3BQ9NY72 215 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 IGKV1-27A0A075B6S5 117 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 ZFPL1O95159 310 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 CLIC3O95833 236 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 HCKP08631 526 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 LIMS3P0CW19 117 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 LIMS4P0CW20 117 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 ERVK11-1P61568 191 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 RPL31P62899 125 aaKnown RBP13.04□□□□□ -0.32
LMX1B-204ENST00000561065 ST3GAL4Q11206 333 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 SMN1Q16637 294 aaKnown RBP13.04□□□□□ -0.32
LMX1B-204ENST00000561065 SAXO1Q8IYX7 474 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 FAM185AQ8N0U4 392 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 PARP16Q8N5Y8 322 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 OR4F5Q8NH21 305 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 THRSPQ92748 146 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 EMG1Q92979 244 aaKnown RBP13.04□□□□□ -0.32
LMX1B-204ENST00000561065 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 PCDHB16Q9NRJ7 776 aa13.04□□□□□ -0.32
LMX1B-204ENST00000561065 FUOMA2VDF0 154 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 SH2D1BO14796 132 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 WIPF1O43516 503 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 FBP1P09467 338 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 RAB3AP20336 220 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 POU3F4P49335 361 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 PDZK1IP1Q13113 114 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 SPIN3Q5JUX0 258 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 OLFML2AQ68BL7 652 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 GDPD3Q7L5L3 318 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 FAM58AQ8N1B3 248 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 MYDGFQ969H8 173 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 AJUBAQ96IF1 538 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 MTCH1Q9NZJ7 389 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 CKLFQ9UBR5 152 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 ERGIC3Q9Y282 383 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 ZNF281Q9Y2X9 895 aa13.03□□□□□ -0.32
LMX1B-204ENST00000561065 SF3B6Q9Y3B4 125 aaKnown RBP13.03□□□□□ -0.32
LMX1B-204ENST00000561065 WNK1Q9H4A3 2382 aa13.02□□□□□ -0.32
LMX1B-204ENST00000561065 F8VVB4 439 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 F8VWA3 439 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 K7N7A8 449 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 MYL12BO14950 172 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 SULT1B1O43704 296 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 TK1P04183 234 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 CRYBA1P05813 215 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 HSPA13P48723 471 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 ETV1P50549 477 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 UBE2E1P51965 193 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 RPL15P61313 204 aaKnown RBP13.02□□□□□ -0.33
LMX1B-204ENST00000561065 PPP3R1P63098 170 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 ZNF273Q14593 569 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 C11orf42Q8N5U0 333 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 ASCC1Q8N9N2 400 aaKnown RBP13.02□□□□□ -0.33
LMX1B-204ENST00000561065 BPIFB6Q8NFQ5 453 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 OR13C9Q8NGT0 318 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 LINC01006Q8NI28 216 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 GGHQ92820 318 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 SLAMF9Q96A28 289 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 SNX22Q96L94 193 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 GPER1Q99527 375 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 ZNF649Q9BS31 505 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 BEX1Q9HBH7 125 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 VPREB3Q9UKI3 123 aa13.02□□□□□ -0.33
LMX1B-204ENST00000561065 A0A1B0GUS0 222 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 MEIOCA2RUB1 952 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 CLPSL1A2RUU4 121 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 OGG1O15527 345 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 TMEM225BP0DP42 221 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 CCL3L1P16619 93 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 PAX6P26367 422 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 ERVFRD-1P60508 538 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 ACSM1Q08AH1 577 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 CDK5R1Q15078 307 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 Q6ZSV7 163 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 OR51A4Q8NGJ6 313 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 S100A13Q99584 98 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 CITED1Q99966 193 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 DPAGT1Q9H3H5 408 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 PSORS1C1Q9UIG5 152 aa13.01□□□□□ -0.33
LMX1B-204ENST00000561065 PRKDCP78527 4128 aaKnown RBP13.01□□□□□ -0.33
LMX1B-204ENST00000561065 IGKV1-9A0A0C4DH69 117 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 BTBD17A6NE02 478 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 E9PI62 339 aa13□□□□□ -0.33
LMX1B-204ENST00000561065 INMTO95050 263 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms