RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 POLR3KQ9Y2Y1 108 aaPredicted RBP18.02■□□□□ 0.48
SNX1-206ENST00000559389 MAB21L2Q9Y586 359 aa18.02■□□□□ 0.48
SNX1-206ENST00000559389 SLC17A2O00624 439 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 AIREO43918 545 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 ZNF780AO75290 641 aaPredicted RBP18.01■□□□□ 0.47
SNX1-206ENST00000559389 LY6G6DO95868 133 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 HAND1O96004 215 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 SERPINA2P20848 420 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 SNU13P55769 128 aaKnown RBP18.01■□□□□ 0.47
SNX1-206ENST00000559389 OR10A3P58181 314 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 LCN2P80188 198 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 SLC22A6Q4U2R8 563 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 FAM166AQ6J272 317 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 ZNF561Q8N587 486 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 OR51T1Q8NGJ9 327 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 KCTD7Q96MP8 289 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 FUNDC2Q9BWH2 189 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 RNF167Q9H6Y7 350 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 V9GY05 133 aa18.01■□□□□ 0.47
SNX1-206ENST00000559389 F8P00451 2351 aa18■□□□□ 0.47
SNX1-206ENST00000559389 A0A1W2PP11 408 aa18■□□□□ 0.47
SNX1-206ENST00000559389 NDUFB3O43676 98 aa18■□□□□ 0.47
SNX1-206ENST00000559389 HTR3BO95264 441 aa18■□□□□ 0.47
SNX1-206ENST00000559389 CSTBP04080 98 aaKnown RBP18■□□□□ 0.47
SNX1-206ENST00000559389 RAB3BP20337 219 aa18■□□□□ 0.47
SNX1-206ENST00000559389 CFPP27918 469 aa18■□□□□ 0.47
SNX1-206ENST00000559389 HTR2CP28335 458 aa18■□□□□ 0.47
SNX1-206ENST00000559389 DUSP1P28562 367 aa18■□□□□ 0.47
SNX1-206ENST00000559389 PSMD7P51665 324 aa18■□□□□ 0.47
SNX1-206ENST00000559389 DVL1P1P54792 670 aaPredicted RBP18■□□□□ 0.47
SNX1-206ENST00000559389 IKZF1Q13422 519 aa18■□□□□ 0.47
SNX1-206ENST00000559389 GPR176Q14439 515 aa18■□□□□ 0.47
SNX1-206ENST00000559389 NHLRC3Q5JS37 347 aa18■□□□□ 0.47
SNX1-206ENST00000559389 CLEC9AQ6UXN8 241 aa18■□□□□ 0.47
SNX1-206ENST00000559389 FGFRL1Q8N441 504 aa18■□□□□ 0.47
SNX1-206ENST00000559389 ZNRF1Q8ND25 227 aa18■□□□□ 0.47
SNX1-206ENST00000559389 PLGRKTQ9HBL7 147 aa18■□□□□ 0.47
SNX1-206ENST00000559389 GHRLQ9UBU3 117 aa18■□□□□ 0.47
SNX1-206ENST00000559389 OR5V1Q9UGF6 321 aa18■□□□□ 0.47
SNX1-206ENST00000559389 TRAV20A0A0B4J274 112 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 ZNF737O75373 536 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 TGFAP01135 160 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 CHRM2P08172 466 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 UBBP0CG47 229 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 CAV3P56539 151 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 RBM11P57052 281 aaKnown RBP17.99■□□□□ 0.47
SNX1-206ENST00000559389 COL10A1Q03692 680 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 IL13RA2Q14627 380 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 PIGYQ3MUY2 71 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 LRRC10Q5BKY1 277 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 GLCCI1Q86VQ1 547 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 NR2C2APQ86WQ0 139 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 OSR2Q8N2R0 312 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 TMEM185AQ8NFB2 350 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 ST8SIA4Q92187 359 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 SLC25A28Q96A46 364 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 DACT3Q96B18 629 aaPredicted RBP17.99■□□□□ 0.47
SNX1-206ENST00000559389 TMEM186Q96B77 213 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 GSX1Q9H4S2 264 aaPredicted RBP17.99■□□□□ 0.47
SNX1-206ENST00000559389 PCDHB16Q9NRJ7 776 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 SLC25A10Q9UBX3 287 aaPredicted RBP17.99■□□□□ 0.47
SNX1-206ENST00000559389 GLS2Q9UI32 602 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 HIVEP1P15822 2718 aa17.99■□□□□ 0.47
SNX1-206ENST00000559389 CELSR1Q9NYQ6 3014 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 PPIAL4CA0A0B4J2A2 164 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 A0A0G2JK05 382 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 C22orf46C9J442 243 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 GTF2F2P13984 249 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 PAX2Q02962 417 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 RAB11BQ15907 218 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 C11orf91Q3C1V1 193 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 TPRA1Q86W33 373 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 MRPS24Q96EL2 167 aaKnown RBP17.98■□□□□ 0.47
SNX1-206ENST00000559389 FAM234AQ9H0X4 552 aa17.98■□□□□ 0.47
SNX1-206ENST00000559389 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.97■□□□□ 0.472e-7■■■■□ 23.1
SNX1-206ENST00000559389 MED13LQ71F56 2210 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 SH2D1BO14796 132 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 GPR37O15354 613 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 GABARAPO95166 117 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 BPNT1O95861 308 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 OR2H2O95918 312 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 SDC2P34741 201 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 CAPZA1P52907 286 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 Q6P435 159 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 SLC16A12Q6ZSM3 486 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 GPR141Q7Z602 305 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 ASCC1Q8N9N2 400 aaKnown RBP17.97■□□□□ 0.47
SNX1-206ENST00000559389 TMEM104Q8NE00 496 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 CST11Q9H112 138 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 HIF1ANQ9NWT6 349 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 ST3GAL6Q9Y274 331 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 VPS13CQ709C8 3753 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 ACANP16112 2415 aa17.97■□□□□ 0.47
SNX1-206ENST00000559389 ZNF469Q96JG9 3925 aaPredicted RBP17.96■□□□□ 0.47
SNX1-206ENST00000559389 IGHV2-70DA0A0C4DH43 119 aa17.96■□□□□ 0.47
SNX1-206ENST00000559389 TMEM82A0PJX8 343 aa17.96■□□□□ 0.47
SNX1-206ENST00000559389 SMIM30A4D0T7 59 aa17.96■□□□□ 0.47
SNX1-206ENST00000559389 IFITM5A6NNB3 132 aa17.96■□□□□ 0.47
SNX1-206ENST00000559389 K7N7A8 449 aa17.96■□□□□ 0.47
SNX1-206ENST00000559389 TK1P04183 234 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms