RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 LGALS8O00214 317 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 WNT9BO14905 357 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 OR7C1O76099 320 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 CYB5R3P00387 301 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 PPIAL4FP0DN26 164 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 PAX1P15863 534 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 GABRR1P24046 479 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 CDK2P24941 298 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 TMEM33P57088 247 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 GMFBP60983 142 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 PITPNAQ00169 270 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 PLA2G7Q13093 441 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 LSAMPQ13449 338 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 TAF9Q16594 264 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 PIGYQ3MUY2 71 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 TEX36Q5VZQ5 186 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 BATF2Q8N1L9 274 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 WDR13Q9H1Z4 485 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 CHODLQ9H9P2 273 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 ZNF701Q9NV72 531 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 HSF4Q9ULV5 492 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 WIPI2Q9Y4P8 454 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 PPIAL4AQ9Y536 164 aa13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 HRNRQ86YZ3 2850 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-203ENST00000547063 OR2AT4A6NND4 320 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 RAB27BO00194 218 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 GEMIN2O14893 280 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 DEGS1O15121 323 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 NDUFA2O43678 99 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 PDCD6O75340 191 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 GLAP06280 429 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 FUT3P21217 361 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 COL8A2P25067 703 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 BLVRBP30043 206 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 MNDAP41218 407 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 IKZF1Q13422 519 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 FAM131AQ6UXB0 335 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 OR4M1Q8NGD0 313 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 RAB1CQ92928 201 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 RAB3CQ96E17 227 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 NICN1Q9BSH3 213 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 DNTTIP1Q9H147 329 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 TREM2Q9NZC2 230 aa13.3□□□□□ -0.28
TRAFD1-203ENST00000547063 TRAV18A0A075B6X5 111 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 RP2O75695 350 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 HAND1O96004 215 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 GSTP1P09211 210 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 CSF3P09919 207 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 ZNF44P15621 663 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 EGR1P18146 543 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 DNASE1P24855 282 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 CD80P33681 288 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 IL18Q14116 193 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 RBM39Q14498 530 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 PYHIN1Q6K0P9 492 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 Q6ZTK2 550 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 MUC20Q8N307 709 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 PPP1R35Q8TAP8 253 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 YIPF5Q969M3 257 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 PLEKHJ1Q9NW61 149 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 BEX4Q9NWD9 120 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 OR14J1Q9UGF5 321 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 CACNG2Q9Y698 323 aa13.29□□□□□ -0.28
TRAFD1-203ENST00000547063 A0A0A6YYD4 124 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 NKX6-3A6NJ46 265 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 RFPL4AA6NLU0 287 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 SERPINE3A8MV23 424 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 RFPL4AL1F8VTS6 287 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 SOCS1O15524 211 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 PSG2P11465 335 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 LMO1P25800 156 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 PRDX2P32119 198 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 MDH2P40926 338 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 ATP5J2P56134 94 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 TAS2R20P59543 309 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 BTG1P62324 171 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 MRPS10P82664 201 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 SCN1BQ07699 218 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 ATAD3CQ5T2N8 411 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 TGIF2LYQ8IUE0 185 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 GSX2Q9BZM3 304 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 AKIP1Q9NQ31 210 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 MRPS7Q9Y2R9 242 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-203ENST00000547063 PTPN13Q12923 2485 aa13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 FOXI3A8MTJ6 420 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 MCRIP1C9JLW8 97 aa13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 OR2H2O95918 312 aa13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 IGHV4-39P01824 125 aa13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 HIST1H1DP16402 221 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 CHATP28329 748 aa13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 DUSP1P28562 367 aa13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 KCNJ3P48549 501 aa13.27□□□□□ -0.29
TRAFD1-203ENST00000547063 PDLIM4P50479 330 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms