RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CHRM2P08172 466 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 PSMB9P28065 219 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 DUSP1P28562 367 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 GABRA5P31644 462 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 OR3A4PP47883 348 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 PAX2Q02962 417 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 COL10A1Q03692 680 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 PAX8Q06710 450 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 HSD17B12Q53GQ0 312 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 FAM27D1Q5T7N8 215 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 UBE2UQ5VVX9 321 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 C1QL2Q7Z5L3 287 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 ASCC1Q8N9N2 400 aaKnown RBP13.94□□□□□ -0.18
LTBR-215ENST00000546296 PXT1Q8NFP0 134 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 SLITRK2Q9H156 845 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 METTL9Q9H1A3 318 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 IL36RNQ9UBH0 155 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 METRNQ9UJH8 293 aa13.94□□□□□ -0.18
LTBR-215ENST00000546296 RPUSD1Q9UJJ7 312 aaKnown RBP13.94□□□□□ -0.18
LTBR-215ENST00000546296 FN1P02751 2386 aaKnown RBP13.94□□□□□ -0.18
LTBR-215ENST00000546296 MAGEA13PA6NCF6 341 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 SH2D1BO14796 132 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 TNFAIP8O95379 198 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 HAND1O96004 215 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 AVPP01185 164 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 SFTPBP07988 381 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 BMXP51813 675 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 CAV3P56539 151 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 RIPPLY3P57055 190 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 SCN1BQ07699 218 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 SPIN3Q5JUX0 258 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 NR1H4Q96RI1 486 aaPredicted RBP13.93□□□□□ -0.18
LTBR-215ENST00000546296 CNTD2Q9H8S5 307 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 OPN4Q9UHM6 478 aa13.93□□□□□ -0.18
LTBR-215ENST00000546296 A0A1W2PQ09 198 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 ARL6IP5O75915 188 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 CDRT1O95170 752 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 HTR3BO95264 441 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 UCHL1P09936 223 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 FAM157CP0CG43 387 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 PPIAL4GP0DN37 164 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 HOXB4P17483 251 aaPredicted RBP13.92□□□□□ -0.18
LTBR-215ENST00000546296 ADRA2CP18825 462 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 SRMP19623 302 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 GABRR1P24046 479 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 MTNR1BP49286 362 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 FABP5Q01469 135 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 ZNF146Q15072 292 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 SSX1Q16384 188 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 TMEM91Q6ZNR0 172 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 C1orf229Q6ZS94 237 aaPredicted RBP13.92□□□□□ -0.18
LTBR-215ENST00000546296 CDH26Q8IXH8 852 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 NKAIN3Q8N8D7 197 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 OR10K1Q8NGX5 313 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 NANPQ8TBE9 248 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 PHYHIPQ92561 330 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 MUL1Q969V5 352 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 DCTN5Q9BTE1 182 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 EXOSC4Q9NPD3 245 aaKnown RBP13.92□□□□□ -0.18
LTBR-215ENST00000546296 PCDHB16Q9NRJ7 776 aa13.92□□□□□ -0.18
LTBR-215ENST00000546296 MRPS28Q9Y2Q9 187 aaKnown RBP13.92□□□□□ -0.18
LTBR-215ENST00000546296 SF3B6Q9Y3B4 125 aaKnown RBP13.92□□□□□ -0.18
LTBR-215ENST00000546296 CCRL2O00421 344 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 SC5DO75845 299 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 CSTBP04080 98 aaKnown RBP13.91□□□□□ -0.18
LTBR-215ENST00000546296 TK1P04183 234 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 GP2P55259 537 aaKnown RBP13.91□□□□□ -0.18
LTBR-215ENST00000546296 FGF12P61328 243 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 ARF6P62330 175 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 NEDD8Q15843 81 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 METTL11BQ5VVY1 283 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 GLT8D1Q68CQ7 371 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 ASCL4Q6XD76 172 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 TSPAN14Q8NG11 270 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 DACT3Q96B18 629 aaPredicted RBP13.91□□□□□ -0.18
LTBR-215ENST00000546296 FAM234AQ9H0X4 552 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 PPIL3Q9H2H8 161 aaKnown RBP13.91□□□□□ -0.18
LTBR-215ENST00000546296 SEBOXQ9HB31 216 aaPredicted RBP13.91□□□□□ -0.18
LTBR-215ENST00000546296 NDUFB11Q9NX14 153 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 ONECUT1Q9UBC0 465 aa13.91□□□□□ -0.18
LTBR-215ENST00000546296 ANK3Q12955 4377 aaKnown RBP13.91□□□□□ -0.18
LTBR-215ENST00000546296 A0A087WXM4 84 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 K7N7A8 449 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 SIRPB1O00241 398 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 DEGS1O15121 323 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 ZNF780AO75290 641 aaPredicted RBP13.9□□□□□ -0.18
LTBR-215ENST00000546296 TOX4O94842 621 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 ZNF44P15621 663 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 CALRP27797 417 aaKnown RBP13.9□□□□□ -0.18
LTBR-215ENST00000546296 SLC22A6Q4U2R8 563 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 ELP2Q6IA86 826 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 GLIPR1L1Q6UWM5 242 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 GDPD3Q7L5L3 318 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 LRRTM1Q86UE6 522 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 CMTM4Q8IZR5 234 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 FAM185AQ8N0U4 392 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 LY6G5BQ8NDX9 201 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 OR4M1Q8NGD0 313 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 OR5D13Q8NGL4 314 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 PPP1R35Q8TAP8 253 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms