RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DTX1Q86Y01 620 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OR2C3Q8N628 320 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 DEFB119Q8N690 84 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OR5L1Q8NGL2 311 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OR14L1PQ8NHC6 308 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 SGK3Q96BR1 496 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 MUCL1Q96DR8 90 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 BCO1Q9HAY6 547 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 PLEK2Q9NYT0 353 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 C19orf25Q9UFG5 118 aaPredicted RBP7.6□□□□□ -1.19
TDP1-204ENST00000545686 FOXD3Q9UJU5 478 aaPredicted RBP7.6□□□□□ -1.19
TDP1-204ENST00000545686 DMRT1Q9Y5R6 373 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 CCDC187A0A096LP49 1063 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 DUXBA0A1W2PPF3 345 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 CXorf65A6NEN9 183 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 RBFOX3A6NFN3 312 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 TP53I11O14683 189 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 YKT6O15498 198 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 TXNL1O43396 289 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OR13C7P0DN81 318 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 MMP9P14780 707 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 PNLIPP16233 465 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 KLK2P20151 261 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 HOXA5P20719 270 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OPRM1P35372 400 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 HTR5AP47898 357 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 RBP2P50120 134 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 RRADP55042 308 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 FXYD4P59646 89 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 NHLH2Q02577 135 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 SNAI3Q3KNW1 292 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 PHLDA2Q53GA4 152 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 PHYHD1Q5SRE7 291 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 FAM27BQ5VT28 67 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 TMEM42Q69YG0 159 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 ZNF100Q8IYN0 542 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 MAML2Q8IZL2 1156 aaPredicted RBP7.6□□□□□ -1.19
TDP1-204ENST00000545686 FBXL14Q8N1E6 418 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 OR10AD1Q8NGE0 317 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 RASL10BQ96S79 203 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 SLC25A31Q9H0C2 315 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 TOLLIPQ9H0E2 274 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 SIRT7Q9NRC8 400 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 NOSIPQ9Y314 301 aaKnown RBP7.6□□□□□ -1.19
TDP1-204ENST00000545686 ABCA7Q8IZY2 2146 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 RTTNQ86VV8 2226 aa7.6□□□□□ -1.19
TDP1-204ENST00000545686 FAM230AA0A1W2PPH8 454 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 C2CD4DB7Z1M9 353 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 NPIPA2E9PIF3 369 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 NPIPA3F8WFD2 350 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 PHF1O43189 567 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 HSPA12AO43301 675 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 CD63P08962 238 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 EN2P19622 333 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 LTBRP36941 435 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 ACER2Q5QJU3 275 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 TSPO2Q5TGU0 170 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 TMEM211Q6ICI0 200 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 DPPA3Q6W0C5 159 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 PPP1R3BQ86XI6 285 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 OSR2Q8N2R0 312 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 SLC35G3Q8N808 338 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 EDARADDQ8WWZ3 215 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 BORCS8Q96FH0 119 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 REEP6Q96HR9 211 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 TECTBQ96PL2 329 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 OPA3Q9H6K4 179 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 PLSCR2Q9NRY7 297 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 MED12Q93074 2177 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 IGKV1-27A0A075B6S5 117 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 ZNF732B4DXR9 585 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 TRDCB7Z8K6 153 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 ANGPTL7O43827 346 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 PDCD6O75340 191 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 HSPB1P04792 205 aaKnown RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 ATP6V0CP27449 155 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 CDX1P47902 265 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 RND3P61587 244 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 BAXQ07812 192 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 CHAF1BQ13112 559 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 KIAA0141Q14154 515 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 EXT1Q16394 746 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 IGSF11Q5DX21 431 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 SP5Q6BEB4 398 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 SPSB3Q6PJ21 355 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 Q6ZS49 121 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 GPR137CQ8N3F9 429 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 OR2G3Q8NGZ4 309 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 GNPNAT1Q96EK6 184 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 TMEM56Q96MV1 263 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 GGACTQ9BVM4 153 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 ULBP2Q9BZM5 246 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 TMEM222Q9H0R3 208 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 PLEKHF2Q9H8W4 249 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 LYRM2Q9NU23 88 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 PUS1Q9Y606 427 aaKnown RBP eCLIP7.59□□□□□ -1.19
TDP1-204ENST00000545686 CHCHD2Q9Y6H1 151 aaPredicted RBP7.59□□□□□ -1.19
TDP1-204ENST00000545686 TMEM56-RWDD3S4R434 201 aa7.59□□□□□ -1.19
TDP1-204ENST00000545686 C3orf85A0A1B0GTC6 90 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 CLEC18AA5D8T8 446 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms