RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 PXT1Q8NFP0 134 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 OR5T2Q8NGG2 359 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 RAB40AQ8WXH6 277 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 H1FXQ92522 213 aaKnown RBP7.93□□□□□ -1.14
CIT-216ENST00000544872 RFT1Q96AA3 541 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 PGLYRP3Q96LB9 341 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 DMRTB1Q96MA1 342 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 DERL3Q96Q80 235 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 NR1H4Q96RI1 486 aaPredicted RBP7.93□□□□□ -1.14
CIT-216ENST00000544872 UQCC2Q9BRT2 126 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 CST11Q9H112 138 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 C7orf69Q9H7B7 122 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 EXOSC4Q9NPD3 245 aaKnown RBP7.93□□□□□ -1.14
CIT-216ENST00000544872 DCAF16Q9NXF7 216 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 SLC25A10Q9UBX3 287 aaPredicted RBP7.93□□□□□ -1.14
CIT-216ENST00000544872 LSM2Q9Y333 95 aaKnown RBP7.93□□□□□ -1.14
CIT-216ENST00000544872 SIRT4Q9Y6E7 314 aaPredicted RBP7.93□□□□□ -1.14
CIT-216ENST00000544872 PRR14LQ5THK1 2151 aa7.93□□□□□ -1.14
CIT-216ENST00000544872 IGKV1-9A0A0C4DH69 117 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 A0A1W2PQ09 198 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 DVL1O14640 695 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 WNT9BO14905 357 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 DEGS1O15121 323 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 SIGLEC5O15389 551 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 PSG2P11465 335 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 GTF2F2P13984 249 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 GABRR1P24046 479 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 FPR2P25090 351 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 SCN1BQ07699 218 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 UBE2UQ5VVX9 321 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 METTL11BQ5VVY1 283 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 WDR25Q64LD2 544 aaPredicted RBP7.92□□□□□ -1.14
CIT-216ENST00000544872 STUMQ69YW2 141 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 CALHM1Q8IU99 346 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 CHST4Q8NCG5 386 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 OR52N4Q8NGI2 321 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 OR51A2Q8NGJ7 313 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 OR5D18Q8NGL1 313 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 NANPQ8TBE9 248 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 MRPS24Q96EL2 167 aaKnown RBP7.92□□□□□ -1.14
CIT-216ENST00000544872 FAM234AQ9H0X4 552 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 CNTD2Q9H8S5 307 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 PLGRKTQ9HBL7 147 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 SPACA1Q9HBV2 294 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 AUP1Q9Y679 476 aa7.92□□□□□ -1.14
CIT-216ENST00000544872 A0A096LNT2 108 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 TRBV5-7A0A0A0MS05 114 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 TRBV23-1A0A0A0MS06 115 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 FAM157AC9JC47 383 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 F5H0A9 414 aaPredicted RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 HTR3BO95264 441 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 ZNF44P15621 663 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 CALRP27797 417 aaKnown RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 IL2RGP31785 369 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 CAV3P56539 151 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 NEDD8Q15843 81 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 CR1LQ2VPA4 569 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 FAM120AOSQ5T036 256 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 AWAT2Q6E213 333 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 RBMS3Q6XE24 437 aaKnown RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 ZNF788Q6ZQV5 615 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 BTN2A1Q7KYR7 527 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 LINC00596Q86U02 117 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 OR13C5Q8NGS8 318 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 ANGPTL6Q8NI99 470 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 RGP1Q92546 391 aaPredicted RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 SGCDQ92629 289 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 SDSLQ96GA7 329 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 SNX22Q96L94 193 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 SPACA5Q96QH8 159 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 NUDT16L1Q9BRJ7 211 aaKnown RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 BARHL1Q9BZE3 327 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 WDR13Q9H1Z4 485 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 SEBOXQ9HB31 216 aaPredicted RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 HMG20AQ9NP66 347 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 MTCH1Q9NZJ7 389 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 MRPS28Q9Y2Q9 187 aaKnown RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 POLR3KQ9Y2Y1 108 aaPredicted RBP7.91□□□□□ -1.14
CIT-216ENST00000544872 PLCE1Q9P212 2302 aa7.91□□□□□ -1.14
CIT-216ENST00000544872 RAI1Q7Z5J4 1906 aaPredicted RBP7.9□□□□□ -1.14
CIT-216ENST00000544872 KIR2DS1A0A191URI9 304 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 A8MXK9 166 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 ANGPTL7O43827 346 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 BPNT1O95861 308 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 HAND1O96004 215 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 UCHL1P09936 223 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 PPIAL4GP0DN37 164 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 IGFBP3P17936 291 aaPredicted RBP7.9□□□□□ -1.14
CIT-216ENST00000544872 BCL3P20749 454 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 BPIFB3P59826 476 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 FGF12P61328 243 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 ERVK11-1P61568 191 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 RPS11P62280 158 aaKnown RBP eCLIP7.9□□□□□ -1.14
CIT-216ENST00000544872 RBM39Q14498 530 aaKnown RBP7.9□□□□□ -1.14
CIT-216ENST00000544872 ZNF146Q15072 292 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 SLC22A6Q4U2R8 563 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 ZNF529Q6P280 563 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 SHISA2Q6UWI4 295 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 GLIPR1L1Q6UWM5 242 aa7.9□□□□□ -1.14
CIT-216ENST00000544872 LYPD2Q6UXB3 125 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms