RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SPSB4Q96A44 273 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 POM121L2Q96KW2 1035 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 FER1L6-AS2Q96M78 137 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 MS4A5Q9H3V2 200 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 WDFY4Q6ZS81 3184 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 A0A1W2PPV4 95 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 NDUFB2O95178 105 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 ASAH2BP0C7U1 165 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 FAM157CP0CG43 387 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 AKR1C4P17516 323 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 LPAR6P43657 344 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 NPY4RP50391 375 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 PDLIM4P50479 330 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 EIF2B1Q14232 305 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 ALKBH6Q3KRA9 238 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 OR2A2Q6IF42 318 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 SLC35F2Q8IXU6 374 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 TMEM45BQ96B21 275 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 OR5B2Q96R09 309 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 WFDC1Q9HC57 220 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 TMEM100Q9NV29 134 aa7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 PEF1Q9UBV8 284 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-221ENST00000542407 CACNA1CQ13936 2221 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 IL18BPO95998 194 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ITGB2P05107 769 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 CD14P08571 375 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ZNF883P0CG24 379 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 HIST1H1CP16403 213 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ADRA2CP18825 462 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ACP1P24666 158 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ARL3P36405 182 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 SLC6A8P48029 635 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 TNFSF10P50591 281 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 DUSP3P51452 185 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 CLDN18P56856 261 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 IL13RA1P78552 427 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 SLC17A1Q14916 467 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ELOA3BQ3SY89 546 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 HIST2H3PS2Q5TEC6 136 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 TMPPEQ6ZT21 453 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ELOA3Q8NG57 546 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 TAAR8Q969N4 342 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ADGRG7Q96K78 797 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 SMIM8Q96KF7 97 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 CNTNAP3Q9BZ76 1288 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 SYT4Q9H2B2 425 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 WDR54Q9H977 334 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 MMP24Q9Y5R2 645 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 A0A1B0GTI1 187 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 A0A1B0GV50 99 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 PROB1E7EW31 1015 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ARPC3O15145 178 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 CCL4P13236 92 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 MPLP40238 635 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 NANOS3P60323 173 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ERVFC1-1P60608 527 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 PPP1R1AQ13522 171 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 RAB31Q13636 194 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 PLA2G2CQ5R387 149 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 FAM69BQ5VUD6 431 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 CPEB2Q7Z5Q1 589 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 BPIFB2Q8N4F0 458 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 COMMD1Q8N668 190 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ZBTB34Q8NCN2 500 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 SLC30A7Q8NEW0 376 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ZPLD1Q8TCW7 415 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ZNRF4Q8WWF5 429 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 C11orf40Q8WZ69 217 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 KTI12Q96EK9 354 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 JSRP1Q96MG2 331 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 TAAR9Q96RI9 348 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 NMNAT2Q9BZQ4 307 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 ARV1Q9H2C2 271 aa7.01□□□□□ -1.29
PDLIM5-221ENST00000542407 A0A1B0GTH9 108 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 BGLAPP02818 100 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 APLNRP35414 380 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 LGALS7P47929 136 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 SULT1A1P50225 295 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 ADAM8P78325 824 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 UBE2V1Q13404 147 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 GGTLC2Q14390 218 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 HERPUD1Q15011 391 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 GFI1BQ5VTD9 330 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 SAMD13Q5VXD3 122 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 NPEPL1Q8NDH3 523 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 OR56B1Q8NGI3 324 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 GPR119Q8TDV5 335 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 C8orf44Q96CB5 159 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 MALSU1Q96EH3 234 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 DAZAP1Q96EP5 407 aaKnown RBP7□□□□□ -1.29
PDLIM5-221ENST00000542407 EIF5A2Q9GZV4 153 aaKnown RBP7□□□□□ -1.29
PDLIM5-221ENST00000542407 RAB1BQ9H0U4 201 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 IER3IP1Q9Y5U9 82 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 KPTNQ9Y664 436 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 KMT2EQ8IZD2 1858 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 CPAMD8Q8IZJ3 1885 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 LOC102723996A0A087X1L8 192 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 C4orf47A7E2U8 309 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 MFNGO00587 321 aa7□□□□□ -1.29
PDLIM5-221ENST00000542407 AQP7O14520 342 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms