RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NMUR2Q9GZQ4 415 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 C16orf95Q9H693 158 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 RMND5AQ9H871 391 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 TMEM165Q9HC07 324 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 DDX18Q9NVP1 670 aaKnown RBP2.37□□□□□ -2.03
SNHG1-202ENST00000535689 VPS29Q9UBQ0 182 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 IFT52Q9Y366 437 aa2.37□□□□□ -2.03
SNHG1-202ENST00000535689 KMT2CQ8NEZ4 4911 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 IGHV1-18A0A0C4DH31 117 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 GNG14A0A1W2PPG7 69 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 G3V4G9 280 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF264O43296 627 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 EFNA2O43921 213 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 TSC22D2O75157 780 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 EEDO75530 441 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 IGHV3-23P01764 117 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 IGHV2-5P01817 119 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 KRT14P02533 472 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 KRT16P08779 473 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 OMGP23515 440 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 IVDP26440 423 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 GABRA3P34903 492 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 OR3A4PP47883 348 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 MARCKSL1P49006 195 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 CEBPDP49716 269 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 GBX2P52951 348 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 LCN2P80188 198 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 SELPLGQ14242 412 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 HERPUD1Q15011 391 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 SYPL1Q16563 259 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 FAM83EQ2M2I3 478 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 SPIN4Q56A73 249 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 SAMD4BQ5PRF9 694 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 UNQ9370/PRO34162Q6UXP9 181 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 CASP12Q6UXS9 341 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 NPSR1Q6W5P4 371 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 CYS1Q717R9 158 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 AAED1Q7RTV5 226 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ZDHHC21Q8IVQ6 265 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 WDFY1Q8IWB7 410 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 CLEC4FQ8N1N0 589 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ZCCHC24Q8N2G6 241 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 NATD1Q8N6N6 113 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ATP6V1C2Q8NEY4 427 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 OR7G2Q8NG99 324 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 OR5W2Q8NH69 310 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 LINC01006Q8NI28 216 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 RHEBL1Q8TAI7 183 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 GPR119Q8TDV5 335 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 C1orf54Q8WWF1 131 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF75CPQ92670 426 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 STMN2Q93045 179 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 TM4SF18Q96CE8 201 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 SLC25A38Q96DW6 304 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 CERS2Q96G23 380 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 C16orf74Q96GX8 76 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF681Q96N22 645 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF184Q99676 751 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 B9D2Q9BPU9 175 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 NIPSNAP3BQ9BS92 247 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 BCL2L14Q9BZR8 327 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 POLR2J2Q9GZM3 115 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 POLR2J3Q9H1A7 115 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 C1orf198Q9H425 327 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ELOVL6Q9H5J4 265 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 IKZF5Q9H5V7 419 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 NARFLQ9H6Q4 476 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 TMEM185BQ9H7F4 350 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 CRLF2Q9HC73 371 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 RAB18Q9NP72 206 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 PALMDQ9NP74 551 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 MMP26Q9NRE1 261 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 GIN1Q9NXP7 522 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 TAS2R7Q9NYW3 318 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 IFNKQ9P0W0 207 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 WARS2Q9UGM6 360 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 SLC7A8Q9UHI5 535 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 NUFIP1Q9UHK0 495 aaKnown RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF256Q9Y2P7 627 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-202ENST00000535689 INSIG2Q9Y5U4 225 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 NOTCH3Q9UM47 2321 aa2.36□□□□□ -2.03
SNHG1-202ENST00000535689 AGRNO00468 2067 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 IGHV1OR15-1A0A075B7D0 117 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 IGHV3-15A0A0B4J1V0 119 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 LOC100653049A0A140TA62 436 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ISPDA4D126 451 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ZFP92A6NM28 416 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 SUPT3HB4E1H0 165 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 LYNX1G3V0Z9 82 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RNASEK-C17orf49H0YIS7 233 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ZSCAN12O43309 604 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RIPK2O43353 540 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TRAF3IP2O43734 574 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 SUPT3HO75486 399 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 MMP23AO75900 390 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 KRT34O76011 436 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 CLIC3O95833 236 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 OTCP00480 354 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 IGHMP01871 453 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 KRT6AP02538 564 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms