RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MTNR1BP49286 362 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 NPY4RP50391 375 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 GNB2P62879 340 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 SPCS2Q15005 226 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 ELP2Q6IA86 826 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF788Q6ZQV5 615 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 TPRA1Q86W33 373 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 LYPD6Q86Y78 171 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR4D6Q8NGJ1 314 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR10K1Q8NGX5 313 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 DYNC2LI1Q8TCX1 351 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 SDSLQ96GA7 329 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 SSBP3Q9BWW4 388 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 IL36GQ9NZH8 169 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 GHRLQ9UBU3 117 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 CLN8Q9UBY8 286 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR14J1Q9UGF5 321 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 V9GY05 133 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 ITPR3Q14573 2671 aa9.37□□□□□ -0.91
TRAPPC4-211ENST00000533012 CREBBPQ92793 2442 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 FAM157AC9JC47 383 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 DVL1O14640 695 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SH2D1BO14796 132 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 GPR37O15354 613 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SIGLEC5O15389 551 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 TGFAP01135 160 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 UBBP0CG47 229 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 GTF2F2P13984 249 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 RAB3BP20337 219 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 HTR2CP28335 458 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 CAPZA1P52907 286 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SNU13P55769 128 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 FGF12P61328 243 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SEC61A1P61619 476 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 VBP1P61758 197 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 IL13RA1P78552 427 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 IKZF1Q13422 519 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF146Q15072 292 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SLC22A6Q4U2R8 563 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 LRRC10Q5BKY1 277 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SPIN3Q5JUX0 258 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 C1orf100Q5SVJ3 147 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 CD276Q5ZPR3 534 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 WDR25Q64LD2 544 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF841Q6ZN19 808 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF561Q8N587 486 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 CD177Q8N6Q3 437 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 MINDY2Q8NBR6 621 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 Q8NFD4 153 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR6M1Q8NGM8 313 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 MCFD2Q8NI22 146 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 MSI2Q96DH6 328 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 MRPS24Q96EL2 167 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 CENPOQ9BU64 300 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SEBOXQ9HB31 216 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 LPAR2Q9HBW0 351 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNF222Q9UK12 451 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 MAB21L2Q9Y586 359 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 PEX16Q9Y5Y5 336 aa9.36□□□□□ -0.91
TRAPPC4-211ENST00000533012 SLC17A2O00624 439 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 DEGS1O15121 323 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 PHF1O43189 567 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 HAND1O96004 215 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 TFF1P04155 84 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 MSMBP08118 114 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 SERPINA2P20848 420 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUSP1P28562 367 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 LCN2P80188 198 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 COL10A1Q03692 680 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 SCN1BQ07699 218 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 CHD3Q12873 2000 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 RAB11BQ15907 218 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 C11orf91Q3C1V1 193 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 CLEC9AQ6UXN8 241 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 OSR2Q8N2R0 312 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 ZNRF1Q8ND25 227 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 OR51T1Q8NGJ9 327 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 PPP1R35Q8TAP8 253 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 GAFA1Q96PS6 74 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 GFI1Q99684 422 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 CST11Q9H112 138 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 IL36RNQ9UBH0 155 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 CTSZQ9UBR2 303 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 TANC2Q9HCD6 1990 aa9.35□□□□□ -0.91
TRAPPC4-211ENST00000533012 LOC105371242A0A075B767 164 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 TRAV20A0A0B4J274 112 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 A0A1B0GW55 424 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 IFITM5A6NNB3 132 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 A8MXK9 166 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 CD5LO43866 347 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 CRTAPO75718 401 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 LY6G6DO95868 133 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 ECDO95905 644 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUX4L2P0CJ85 424 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUX4L3P0CJ86 424 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUX4L4P0CJ87 422 aa9.34□□□□□ -0.91
TRAPPC4-211ENST00000533012 DUX4L5P0CJ88 424 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms