RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 CAPRIN1Q14444 709 aaKnown RBP5.17□□□□□ -1.58
LSM1-202ENST00000520286 SGCAQ16586 387 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 NCBP2-AS2Q69YL0 99 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 TEX261Q6UWH6 196 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 ACP7Q6ZNF0 438 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 COMMD7Q86VX2 200 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 JAGN1Q8N5M9 183 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 GDPD1Q8N9F7 314 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 DCAF4L2Q8NA75 395 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 DUSP18Q8NEJ0 188 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 CCDC54Q8NEL0 328 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 ZNF680Q8NEM1 530 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 C19orf60Q96EN9 201 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 IMMP1LQ96LU5 166 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 RNF145Q96MT1 663 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 TRNT1Q96Q11 434 aaKnown RBP5.17□□□□□ -1.58
LSM1-202ENST00000520286 SNRNP25Q9BV90 132 aaKnown RBP5.17□□□□□ -1.58
LSM1-202ENST00000520286 GABARAPL3Q9BY60 117 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 CCDC90BQ9GZT6 254 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 C8orf33Q9H7E9 229 aaPredicted RBP5.17□□□□□ -1.58
LSM1-202ENST00000520286 SYNDIG1Q9H7V2 258 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 KCNJ16Q9NPI9 418 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 IFT46Q9NQC8 304 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 CISHQ9NSE2 258 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 KIF25-AS1Q9Y6Z4 181 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 U3KQ87 197 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 GVINP1Q7Z2Y8 2422 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 PLXNA3P51805 1871 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 MIA3Q5JRA6 1907 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 FAM186AA6NE01 2351 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 C5orf42Q9H799 3197 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ERI2A8K979 691 aaKnown RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 E5RI56 91 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 UBFD1O14562 309 aaKnown RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 DPM1O60762 260 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 CLDN11O75508 207 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 LDOC1O95751 146 aaPredicted RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 AIFM1O95831 613 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 C6orf47O95873 294 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ACTL6AO96019 429 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 RETP07949 1114 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 IGHV3-43DP0DP04 118 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 IFI30P13284 250 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 AK4P27144 223 aaPredicted RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 MAGEA2P43356 314 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 BLVRAP53004 296 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 KRTAP10-9P60411 292 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 LYZP61626 148 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 STXBP1P61764 594 aaKnown RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 RRAS2P62070 204 aaPredicted RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 PSPHP78330 225 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 IL5RAQ01344 420 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 CDH17Q12864 832 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 TRAM2Q15035 370 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 GRK1Q15835 563 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 PGGHGQ32M88 737 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 RNF212Q495C1 297 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 STUMQ69YW2 141 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 FRMPD2BQ6IN97 320 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 SPESP1Q6UW49 350 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 FAM183BPQ6ZVS7 135 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 CCNYL1Q8N7R7 359 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 SUMF2Q8NBJ7 301 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 OR5B17Q8NGF7 314 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 OR52E5Q8NH55 327 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ITFG1Q8TB96 612 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 RXFP2Q8WXD0 754 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 RBPMSQ93062 196 aaKnown RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 YIPF5Q969M3 257 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ZNF707Q96C28 371 aaPredicted RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 SERPINB11Q96P15 392 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 REG4Q9BYZ8 158 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ZYG11BQ9C0D3 744 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 RGCCQ9H4X1 137 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 BEX1Q9HBH7 125 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 DYRK4Q9NR20 520 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 COA4Q9NYJ1 87 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ENOPH1Q9UHY7 261 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 SCML1Q9UN30 329 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 RHBDD3Q9Y3P4 386 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 HEBP2Q9Y5Z4 205 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 UBIAD1Q9Y5Z9 338 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ANKRD36A6QL64 1941 aa5.16□□□□□ -1.58
LSM1-202ENST00000520286 ZNF638Q14966 1978 aaKnown RBP5.16□□□□□ -1.58
LSM1-202ENST00000520286 TRAV39A0A0B4J263 110 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 PQLC2LA1A4F0 135 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 HIDE1A8MVS5 230 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 MYL12BO14950 172 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 PLA2G10O15496 165 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 FCN3O75636 299 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 SCELO95171 688 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 TGM6O95932 706 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 CD160O95971 181 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 IFNA14P01570 189 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 CDK1P06493 297 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 SERPINE2P07093 398 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 HOXB8P17481 243 aaPredicted RBP5.15□□□□□ -1.59
LSM1-202ENST00000520286 MYL12AP19105 171 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 HOXA9P31269 272 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 CTRLP40313 264 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms